CoexViewer

Coexpression detail for PCNA2 and CDC45
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath PCNA2 proliferating cell nuclear antigen 2 817506 At2g29570 0.45 8.20 8.41 5.77 153.90 2.32 2.43 0.75 2.45 0.50 5.33
ath CDC45 cell division cycle 45 822101 At3g25100 0.45
Platform:

coex z = 8.4073



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 817506
(z-scored expression)		 822101
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
28.8 -5.6 -5.1 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
26.7 -3.9 -6.8 SRP100938 SRR5304658 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
16.5 -4.1 -4.1 SRP091641 SRR4426351 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
16.4 -4.6 -3.6 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
16.4 -4.6 -3.6 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
16.4 -3.9 -4.2 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
16.2 -3.8 -4.3 SRP277946 SRR12470092 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.0 -4.4 -3.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
13.2 -3.5 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
13.0 -4.0 -3.2 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.9 -3.2 -4.1 SRP091641 SRR4426344 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.7 -3.3 -3.9 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.2 -3.2 -3.9 SRP044776 SRR1523938 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
12.2 3.6 3.4 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.8 -4.0 -2.9 SRP339340 SRR16119311 Single seeds exhibit transcriptional heterogeneity during secondary dormancy induction
11.6 -3.2 -3.6 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.4 -2.7 -4.2 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
11.2 -3.2 -3.5 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
11.0 -2.9 -3.8 SRP100064 SRR5263007 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.8 -2.6 -4.2 SRP093675 SRR5037661 Infection of Arabidopsis thaliana seedlings with the Pseudomonas syringae strain DC3000 cor- carrying the effector HopBB1
10.8 -2.7 -4.1 SRP091641 SRR4426504 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.7 -3.3 -3.2 SRP187381 SRR8662042 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
10.6 -5.4 -2.0 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.5 -1.9 -5.5 SRP090458 SRR4295949 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.4 -3.3 -3.2 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.3 -1.9 -5.3 SRP201971 SRR9331181 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types
Note: Samples whose contribution is more than 10 are outputted.



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