CoexViewer
Coexpression detail for PCNA2 and DUT1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | PCNA2 | proliferating cell nuclear antigen 2 | 817506 | At2g29570 | 0.45 | 10.52 | 9.14 | 9.06 | 4.50 | 4.61 | 4.20 | 5.38 | 4.41 | 1.40 | 5.61 | |
| ath | DUT1 | DUTP-PYROPHOSPHATASE-LIKE 1 | 823847 | At3g46940 | 0.45 |
|
coex z = 9.1389 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 817506 (z-scored expression) |
823847 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 31.0 | -5.6 | -5.5 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 20.1 | -4.4 | -4.6 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 18.2 | -4.7 | -3.8 | SRP073487 | SRR3401835 | Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant. |
| 18.0 | -4.6 | -3.9 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 18.0 | -4.6 | -3.9 | SRP285380 | SRR12712240 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 14.3 | -4.0 | -3.6 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 14.0 | -3.5 | -4.0 | SRP251062 | SRR11206305 | Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants |
| 13.5 | -3.9 | -3.5 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 12.8 | -3.4 | -3.8 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 12.3 | -4.1 | -3.0 | SRP091641 | SRR4426351 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 11.7 | -3.2 | -3.7 | SRP083970 | SRR4115297 | The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq] |
| 11.1 | -3.2 | -3.5 | SRP044776 | SRR1523938 | High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade |
| 11.1 | -2.8 | -3.9 | SRP090459 | SRR4296043 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI] |
| 10.9 | -3.4 | -3.2 | SRP039091 | SRR1179986 | Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource |
| 10.8 | -3.5 | -3.1 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 10.8 | -3.3 | -3.3 | SRP086629 | SRR4175036 | A global view of RNA-protein interactions reveals novel root hair cell fate regulators |
| 10.7 | -2.0 | -5.5 | ERP116123 | ERR3414688 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.7 | -3.5 | -3.0 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 10.6 | -3.3 | -3.2 | SRP114806 | SRR5894632 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.6 | -3.5 | -3.1 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 10.3 | -3.2 | -3.3 | SRP148699 | SRR7204079 | An essential role for Abscisic acid in the regulation of xylem fibre differentiation |
| 10.3 | -2.9 | -3.5 | SRP071947 | SRR3234413 | Genome-wide analysis of transcription, H2A.Z, nucleosomes and HSF1 dynamics in response to temperature increase in Arabidopsis thaliana [RNA-seq I] |
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