CoexViewer
Coexpression detail for XID and ELP1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | XID | myosin XI D | 817886 | At2g33240 | 0.12 | 4.72 | 3.10 | 5.05 | 59.70 | 1.98 | 1.91 | 2.83 | 2.91 | 3.42 | 0.75 | |
| ath | ELP1 | EDM2-like protein1 | 834861 | At5g48090 | 0.12 |
|
coex z = 3.103 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 817886 (z-scored expression) |
834861 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 38.5 | -6.9 | -5.6 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 24.0 | -4.3 | -5.6 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 20.0 | -5.8 | -3.5 | SRP199288 | SRR9113089 | In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size |
| 14.8 | -4.5 | -3.3 | SRP234036 | SRR10560270 | Gene expression profile of Arabidopsis thaliana wild type and siz1-2 mutant during in vitro shoot regeneration on callus inducing media (CIM) and shoot inducing media (SIM) |
| 14.3 | -4.7 | -3.1 | SRP282437 | SRR12642245 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
| 14.3 | -4.7 | -3.1 | SRP282437 | SRR12642236 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
| 14.3 | -6.0 | -2.4 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 13.4 | -1.9 | -7.0 | SRP100064 | SRR5263131 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 11.9 | -4.6 | -2.6 | SRP277946 | SRR12469896 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.9 | -4.6 | -2.6 | SRP277946 | SRR12470035 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.7 | -6.0 | -2.0 | SRP189895 | SRR8816103 | Transcriptomic changes in Arabidopsis thaliana upon the expression of mutated TFIIS |
| 11.5 | -2.9 | -3.9 | ERP015703 | ERR1417891 | Transcriptomes of eight Arabidopsis thaliana accessions reveal core conserved, genotype- and organ-specific responses to flooding stress |
| 11.1 | -2.7 | -4.2 | SRP071947 | SRR3234410 | Genome-wide analysis of transcription, H2A.Z, nucleosomes and HSF1 dynamics in response to temperature increase in Arabidopsis thaliana [RNA-seq I] |
| 10.9 | -7.1 | -1.5 | SRP155742 | SRR8699976 | Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors |
| 10.8 | -2.3 | -4.8 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 10.8 | -3.0 | -3.7 | SRP333850 | SRR15593616 | Arabidopsis COILIN orchestrates transcriptional as well as post-transcriptional regulation to combat pathogens |
| 10.6 | -2.4 | -4.5 | SRP334993 | SRR15679192 | Next Generation Sequencing Facillitates Quantitative Analysis of Wild Type and snrk1a1/a2 mutant Transcriptomes |
| 10.5 | -4.7 | -2.2 | SRP187381 | SRR8662109 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 10.4 | 2.7 | 3.9 | SRP070918 | SRR3193465 | Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2. |
| 10.1 | -3.6 | -2.8 | SRP158306 | SRR7695191 | Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq] |
| 10.1 | -3.2 | -3.1 | SRP269252 | SRR12110257 | Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length |
| 10.1 | -2.9 | -3.5 | SRP361795 | SRR18163831 | Clock controlled and cold induced CDF6 alters growth and development to changing temperatures |
| 10.0 | -4.7 | -2.1 | SRP334993 | SRR15679184 | Next Generation Sequencing Facillitates Quantitative Analysis of Wild Type and snrk1a1/a2 mutant Transcriptomes |
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