CoexViewer

Coexpression detail for AT2G39725 and AT4G35980
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT2G39725 LYR family of Fe/S cluster biogenesis protein 818557 At2g39725 0.28 5.09 4.70 4.11 7192.30 2.81 -0.17 0.77 0.09 -0.13 2.33
ath AT4G35980 uncharacterized protein 829752 At4g35980 0.28
Platform:

coex z = 4.6993



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 818557
(z-scored expression)		 829752
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
34.7 -5.4 -6.4 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
21.6 -4.9 -4.4 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
18.8 -6.1 -3.1 SRP277946 SRR12469999 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
17.0 -3.8 -4.4 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
16.7 -3.8 -4.4 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
16.7 -4.2 -3.9 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
15.2 -3.5 -4.4 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
15.1 -4.0 -3.8 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.1 -8.0 -1.7 SRP158306 SRR7694773 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
13.8 -3.1 -4.4 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
13.7 -3.3 -4.2 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
13.4 -4.0 -3.4 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.4 -5.2 -2.6 SRP074485 SRR3480157 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
13.2 -3.5 -3.7 ERP123539 ERR4471739 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.2 -3.5 -3.7 ERP123539 ERR4471734 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.2 -3.5 -3.7 ERP123539 ERR4471736 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.2 -3.5 -3.7 ERP123539 ERR4471738 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.2 -3.5 -3.7 ERP123539 ERR4471735 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.2 -3.5 -3.7 ERP123539 ERR4471737 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.2 -3.9 -3.4 SRP234996 SRR10603562 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
13.1 -3.3 -4.0 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.2 3.0 4.0 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.8 -3.0 -4.0 SRP114806 SRR5894662 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.4 3.3 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.4 -4.1 -2.8 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.2 -5.6 -2.0 SRP325022 SRR14877134 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.2 3.3 3.3 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.1 -2.4 -4.6 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.1 3.0 3.7 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
11.1 -3.7 -3.0 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
11.0 3.3 3.3 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.9 -2.6 -4.2 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.5 -6.1 -1.7 SRP277946 SRR12469710 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 3.0 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.4 -3.5 -3.0 SRP126574 SRR6369550 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.3 -2.6 -4.0 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.1 -3.1 -3.2 SRP090459 SRR4296060 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
10.1 -3.3 -3.0 SRP101641 SRR5330626 Chloroplast signalling gates thermotolerance in Arabidopsis
Note: Samples whose contribution is more than 10 are outputted.



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