CoexViewer

Coexpression detail for AT2G39725 and ATUBC2-1
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT2G39725 LYR family of Fe/S cluster biogenesis protein 818557 At2g39725 0.28 4.52 4.27 3.55 120.10 1.89 1.47 2.08 2.27 1.47 2.15
ath ATUBC2-1 Ubiquitin-conjugating enzyme family protein 841072 At1g45050 0.28
Platform:

coex z = 4.2669



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 818557
(z-scored expression)		 841072
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
28.4 -5.4 -5.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
23.4 -5.2 -4.5 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
19.1 -4.9 -3.9 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
18.4 -3.7 -4.9 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
18.2 -4.2 -4.3 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
16.2 -4.0 -4.1 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
15.0 -5.2 -2.9 SRP074485 SRR3480157 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
14.0 -8.0 -1.7 SRP158306 SRR7694773 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
13.7 -3.5 -3.9 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
13.7 -3.5 -3.9 ERP123539 ERR4471734 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.7 -3.5 -3.9 ERP123539 ERR4471739 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.7 -3.5 -3.9 ERP123539 ERR4471738 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.7 -3.5 -3.9 ERP123539 ERR4471735 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.9 -5.6 -2.3 SRP325022 SRR14877134 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
12.9 -3.1 -4.1 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
12.8 -3.8 -3.3 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.7 -3.0 -4.2 SRP101274 SRR5308822 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
12.5 -2.9 -4.3 SRP100712 SRR5285680 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
12.3 -4.1 -3.0 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.2 -2.9 -4.2 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
12.0 -2.9 -4.1 ERP116123 ERR3414638 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.9 -4.0 -3.0 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.6 -3.8 -3.0 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
11.5 -3.3 -3.5 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.4 -4.3 -2.6 SRP119072 SRR6113963 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
11.3 -2.7 -4.1 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
11.2 3.3 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.1 -3.7 -3.0 SRP150217 SRR7289547 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.6 3.0 3.5 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.5 3.5 3.0 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
10.4 3.4 3.1 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.3 3.3 3.1 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.2 -3.2 -3.2 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
10.2 -4.4 -2.3 SRP154321 SRR7536055 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
10.1 3.0 3.4 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.1 -2.5 -4.1 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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