CoexViewer

Coexpression detail for AT2G39750 and RBL3
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT2G39750 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 818560 At2g39750 0.7 5.29 5.31 3.83 421.00 0.87 0.95 -0.35 5.47 0.59 3.68
ath RBL3 RHOMBOID-like protein 3 830616 At5g07250 0.7
Platform:

coex z = 5.3145



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 818560
(z-scored expression)		 830616
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
46.2 -6.9 -6.7 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
28.3 -5.4 -5.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
26.8 -5.8 -4.6 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
20.9 -4.3 -4.8 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
19.9 4.6 4.3 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
19.8 -7.6 -2.6 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
17.6 3.6 4.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
17.4 -4.0 -4.3 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.3 -4.2 -4.1 SRP274404 SRR12356829 Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [w5C6]
16.3 -5.9 -2.8 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
15.4 -4.6 -3.4 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
15.2 -3.8 -4.0 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
15.2 -3.7 -4.2 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
13.7 -3.8 -3.6 SRP324081 SRR14813615 ARATH-IN-OUT
13.7 -3.8 -3.6 SRP362867 SRR18254735 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
13.7 -3.6 -3.8 SRP279454 SRR12554216 RNA-seq analysis of WT, aipp3, aipp2, paipp2, aipp2/paipp2, cpl2, lhp1, and clf in Arabidopsis
13.6 -3.7 -3.7 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
13.2 -3.4 -3.8 SRP100064 SRR5263029 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
13.2 -3.6 -3.7 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
12.9 4.3 3.0 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.7 -3.8 -3.3 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.6 3.9 3.3 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.6 3.3 3.9 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
12.6 -3.9 -3.2 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.5 -3.6 -3.4 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
12.4 3.6 3.4 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.4 3.6 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.3 -3.4 -3.6 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
12.0 -3.5 -3.4 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.0 3.6 3.4 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.8 -3.5 -3.4 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.7 -3.7 -3.2 SRP249854 SRR11103165 A dynamic pattern of local auxin sources is required for root regeneration
11.7 3.5 3.4 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.6 -3.5 -3.3 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.6 3.5 3.3 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.5 -3.9 -2.9 SRP187381 SRR8662285 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
11.4 -3.2 -3.5 SRP102178 SRR5360867 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.4 -3.2 -3.5 SRP091641 SRR4426632 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.3 -3.1 -3.7 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
11.2 -3.5 -3.2 SRP105272 SRR5482528 Cell type transcriptomic profile of the Arabidopsis root stem cell niche
11.0 -3.7 -3.0 SRP076846 SRR3707344 The MBD7 complex promotes expression of methylated transgenes without significantly altering their methylation status (mRNA-seq)
11.0 -3.4 -3.3 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.9 -3.7 -2.9 SRP145580 SRR7160920 Gene expression responses to ABA and to osmotic stress in the pyl112458 379101112 mutant
10.9 3.1 3.5 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 -4.6 -2.4 SRP258701 SRR11614758 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
10.8 -3.9 -2.8 ERP116123 ERR3414638 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.6 -4.6 -2.3 SRP100712 SRR5285649 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
10.6 -3.2 -3.3 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.5 -2.7 -3.8 ERP118109 ERR3624353 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
10.4 -2.6 -4.0 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.4 3.7 2.8 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 -2.6 -4.0 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.4 -3.2 -3.2 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
10.3 3.5 3.0 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -3.7 -2.8 SRP214585 SRR9681378 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.3 -4.1 -2.5 SRP234996 SRR10603594 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
10.3 -3.2 -3.2 SRP272650 SRR12272429 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
10.1 -2.7 -3.7 SRP104760 SRR5467211 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
10.0 -3.1 -3.2 SRP105346 SRR5483624 The developmental regulator PKL is required to maintain correct DNA methylation patterns at RNA-directed DNA methylation loci (RNA-Seq)
10.0 3.5 2.9 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
Note: Samples whose contribution is more than 10 are outputted.



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