CoexViewer

Coexpression detail for AT2G39750 and AT5G41870
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT2G39750 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 818560 At2g39750 0.7 5.08 5.25 3.53 71.80 1.07 1.88 1.45 3.04 -0.35 4.03
ath AT5G41870 Pectin lyase-like superfamily protein 834192 At5g41870 0.7
Platform:

coex z = 5.248



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 818560
(z-scored expression)		 834192
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
37.7 -6.9 -5.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
30.5 -5.5 -5.6 ERP115370 ERR3333443 Arabidopsis tissue atlas
25.0 -5.4 -4.6 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
23.7 -5.8 -4.1 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
21.8 -4.0 -5.5 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
19.9 -4.3 -4.6 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
16.1 -3.6 -4.5 SRP090913 SRR4360366 WallOmics
15.7 -3.9 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
15.5 4.6 3.4 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.3 -3.8 -4.0 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
15.1 -4.0 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.3 4.3 3.3 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.1 3.6 3.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.8 -3.7 -3.8 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
13.5 3.6 3.7 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.1 -4.6 -2.9 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
12.8 -3.7 -3.5 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
12.8 -3.5 -3.7 SRP311610 SRR14028822 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.7 -2.9 -4.4 SRP126574 SRR6369550 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
12.5 -3.3 -3.8 ERP116123 ERR3414641 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
12.5 3.6 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.4 -3.6 -3.5 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
12.3 -3.8 -3.2 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
12.2 -2.6 -4.6 SRP091641 SRR4426959 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.1 -2.7 -4.4 SRP104760 SRR5467210 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
11.9 -5.9 -2.0 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.7 -3.7 -3.2 SRP137763 SRR6950045 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
11.7 -3.5 -3.4 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.7 -3.3 -3.5 SRP282437 SRR12642127 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
11.5 -3.3 -3.5 SRP201680 SRR9313625 RNA-seq of 14 days old arabidopsis in Col hda6 ldl1/2 and hda6/ldl1/2
11.4 -3.2 -3.6 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
11.3 -3.7 -3.1 SRP076846 SRR3707344 The MBD7 complex promotes expression of methylated transgenes without significantly altering their methylation status (mRNA-seq)
11.3 3.5 3.2 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.3 -3.5 -3.2 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.2 3.7 3.0 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 -1.9 -5.8 SRP266133 SRR11934567 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.0 -2.6 -4.2 SRP119072 SRR6113965 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
10.9 -3.1 -3.5 SRP126872 SRR6381405 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.9 -3.6 -3.0 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.8 -3.4 -3.2 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
10.7 -3.8 -2.8 SRP324081 SRR14813615 ARATH-IN-OUT
10.7 -3.8 -2.8 SRP362867 SRR18254735 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
10.5 3.6 3.0 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 -3.2 -3.3 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.4 -2.9 -3.5 SRP288594 SRR12899060 Transcriptional response of A. thaliana Root and Shoot tissue to light stress and presence of microbial communities in myc2-3 and MYC2-Flag lines
10.2 -3.5 -2.9 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 3.5 2.9 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 -3.0 -3.3 SRP126872 SRR6381404 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
Note: Samples whose contribution is more than 10 are outputted.



The preparation time of this page was 0.7 [sec].