CoexViewer
Coexpression detail for AT2G39750 and AT1G77260
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT2G39750 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 818560 | At2g39750 | 0.7 | 6.68 | 5.45 | 6.12 | 601.00 | 3.32 | 1.04 | 1.50 | 1.11 | 0.75 | 3.98 | |
| ath | AT1G77260 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 844062 | At1g77260 | 0.7 |
|
coex z = 5.4475 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 818560 (z-scored expression) |
844062 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 43.4 | -6.9 | -6.3 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 29.7 | -5.4 | -5.5 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 27.7 | -7.6 | -3.7 | SRP155742 | SRR8699957 | Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors |
| 23.0 | -4.3 | -5.3 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 23.0 | 4.6 | 5.0 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 20.9 | -5.8 | -3.6 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 18.7 | -4.6 | -4.1 | SRP100712 | SRR5285649 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 16.9 | -4.0 | -4.2 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 16.3 | -4.0 | -4.1 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 16.1 | -3.9 | -4.1 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 15.5 | 3.6 | 4.4 | SRP277946 | SRR12470192 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 15.5 | 3.6 | 4.3 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 15.4 | -3.8 | -4.0 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 15.1 | 4.3 | 3.5 | SRP277946 | SRR12470193 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.3 | -5.5 | -2.6 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 14.0 | -4.0 | -3.5 | SRP101274 | SRR5308791 | During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight. |
| 14.0 | 3.6 | 3.9 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 13.4 | -4.6 | -2.9 | SRP258701 | SRR11614791 | Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence |
| 13.4 | -5.9 | -2.3 | SRP114806 | SRR5894583 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 13.0 | -3.5 | -3.7 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 13.0 | 3.9 | 3.4 | SRP277946 | SRR12470201 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.8 | -3.6 | -3.5 | SRP251246 | SRR11213957 | Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis |
| 12.8 | 3.5 | 3.6 | SRP037984 | SRR1170682 | Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression |
| 12.7 | -3.7 | -3.5 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 12.6 | 3.6 | 3.5 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 12.3 | -3.5 | -3.5 | SRP150217 | SRR7289570 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 12.2 | -5.0 | -2.5 | SRP267137 | SRR12005730 | ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks |
| 12.1 | 3.4 | 3.5 | SRP277946 | SRR12469632 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.1 | -3.9 | -3.1 | SRP119870 | SRR6166379 | Transcriptomic characterization of spl7 and Col-0 ecotypes of Arabidopsis reveals new aspects of Fe-Cu crosstalk |
| 12.1 | -3.9 | -3.1 | ERP116123 | ERR3414638 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 11.9 | 3.6 | 3.3 | SRP311610 | SRR14028738 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 11.9 | -3.2 | -3.7 | SRP272650 | SRR12272429 | Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity |
| 11.8 | 2.9 | 4.0 | SRP254177 | SRR11429303 | Time course of brassinolide treatment on Arabidopsis seedlings |
| 11.8 | 3.5 | 3.4 | SRP277946 | SRR12470188 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.5 | 3.1 | 3.7 | SRP103736 | SRR5440785 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 11.5 | -3.8 | -3.0 | SRP277946 | SRR12469812 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.4 | 3.7 | 3.1 | SRP277946 | SRR12470208 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.4 | 3.5 | 3.3 | SRP311610 | SRR14028736 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 11.4 | 2.3 | 4.9 | SRP266133 | SRR11934683 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 11.4 | 3.3 | 3.4 | SRP029957 | SRR988015 | Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression |
| 11.3 | -3.8 | -3.0 | SRP362867 | SRR18254735 | Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses |
| 11.3 | -3.8 | -3.0 | SRP324081 | SRR14813615 | ARATH-IN-OUT |
| 11.2 | -3.7 | -3.1 | SRP249854 | SRR11103165 | A dynamic pattern of local auxin sources is required for root regeneration |
| 11.2 | -3.0 | -3.7 | SRP039091 | SRR1179986 | Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource |
| 11.2 | -3.2 | -3.4 | SRP311610 | SRR14028823 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 11.2 | 3.5 | 3.2 | SRP277946 | SRR12470189 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.1 | 3.3 | 3.4 | SRP189792 | SRR8800692 | Role of AtMLKLs in response to powdery mildew fungus |
| 11.0 | 3.5 | 3.1 | SRP311610 | SRR14028739 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 11.0 | 3.2 | 3.4 | SRP277946 | SRR12470065 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.0 | -3.7 | -2.9 | SRP145580 | SRR7160920 | Gene expression responses to ABA and to osmotic stress in the pyl112458 379101112 mutant |
| 10.9 | -3.4 | -3.2 | SRP101641 | SRR5330614 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 10.9 | 3.5 | 3.1 | SRP311610 | SRR14028737 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 10.9 | -3.1 | -3.6 | SRP269252 | SRR12110257 | Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length |
| 10.8 | -3.5 | -3.1 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.8 | -3.2 | -3.4 | ERP116123 | ERR3414637 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.8 | -3.3 | -3.3 | ERP116123 | ERR3414641 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.7 | -3.7 | -2.9 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 10.6 | -3.2 | -3.3 | SRP173260 | SRR8310903 | Functional relationship of GUN1 and FUG1 in plastid proteostasis |
| 10.3 | 2.9 | 3.6 | SRP285090 | SRR12697055 | Differential alteration of plant functions by homologous fungal candidate effectors |
| 10.3 | -3.8 | -2.7 | SRP093913 | SRR5054306 | Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis |
| 10.2 | -3.0 | -3.4 | SRP126872 | SRR6381404 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
| 10.2 | 2.9 | 3.5 | SRP103736 | SRR5440786 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 10.1 | 3.1 | 3.3 | SRP277946 | SRR12470191 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.1 | -2.8 | -3.7 | SRP214585 | SRR9681567 | Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins |
| 10.1 | -3.2 | -3.2 | SRP073724 | SRR3419765 | Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system |
The preparation time of this page was 0.7 [sec].
