CoexViewer
Coexpression detail for AT2G40240 and AT4G17440
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|
| ath | AT2G40240 | Tetratricopeptide repeat (TPR)-like superfamily protein | 818616 | At2g40240 | 0.24 | 4.21 | 4.28 | 1.62 | |
| ath | AT4G17440 | chromogranin (DUF1639) | 827455 | At4g17440 | 0.24 |
|
coex z = 4.2836 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 818616 (z-scored expression) |
827455 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 20.9 | -4.1 | -5.0 | ERP116123 | ERR3414638 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 20.4 | -4.0 | -5.0 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 17.7 | -3.8 | -4.7 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 17.2 | -6.7 | -2.6 | SRP091641 | SRR4426502 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 16.7 | -2.8 | -6.0 | SRP083970 | SRR4115297 | The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq] |
| 16.5 | -5.6 | -2.9 | SRP100064 | SRR5263013 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 15.9 | -5.8 | -2.8 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 14.8 | -4.1 | -3.6 | SRP285380 | SRR12712240 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 14.8 | -4.1 | -3.6 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 14.7 | -3.2 | -4.6 | SRP297585 | SRR13239294 | mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos |
| 14.3 | -2.8 | -5.1 | SRP258701 | SRR11614791 | Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence |
| 14.2 | -4.2 | -3.4 | SRP132865 | SRR6726398 | Molecular basis of flowering under natural long-day conditions in Arabidopsis |
| 13.8 | -3.5 | -4.0 | SRP090459 | SRR4296043 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI] |
| 13.5 | -7.6 | -1.8 | SRP214585 | SRR9681428 | Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins |
| 12.8 | -3.1 | -4.2 | SRP102178 | SRR5360867 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 12.7 | -4.0 | -3.2 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 12.5 | -3.6 | -3.5 | SRP285119 | SRR12698781 | Time of day prioritizes the pool of translating mRNAs in response to heat stress |
| 12.5 | -3.4 | -3.7 | SRP251246 | SRR11213957 | Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis |
| 12.5 | -3.7 | -3.4 | SRP050945 | SRR1696859 | Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana |
| 12.4 | -4.0 | -3.1 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.9 | -3.2 | -3.7 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 11.7 | -2.8 | -4.2 | SRP361288 | SRR18124807 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 11.5 | -2.9 | -3.9 | SRP073379 | SRR3393591 | Arabidopsis BIC1 inactivates CRY2 by suppressing the blue light-dependent cryptochrome dimerization |
| 11.3 | -3.5 | -3.3 | SRP108255 | SRR5627125 | Identifications of a novel group of intra-genic interactive putative enhancers reveals a distinctive enhancer architectures in plants |
| 11.2 | -2.9 | -3.9 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 11.2 | -4.0 | -2.8 | SRP238608 | SRR10760446 | Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock |
| 10.9 | -3.1 | -3.5 | SRP187156 | SRR8648403 | Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection |
| 10.9 | -3.2 | -3.4 | SRP169564 | SRR8206413 | Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression |
| 10.7 | 3.3 | 3.3 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.6 | -2.6 | -4.1 | SRP126872 | SRR6381398 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
| 10.3 | -2.1 | -4.9 | SRP090913 | SRR8185440 | WallOmics |
The preparation time of this page was 0.8 [sec].
