CoexViewer
Coexpression detail for EXPA8 and KDR
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|
| ath | EXPA8 | expansin A8 | 818656 | At2g40610 | 0.54 | 8.26 | 8.81 | 5.81 | |
| ath | KDR | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 839585 | At1g26945 | 0.54 |
|
coex z = 8.8064 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 818656 (z-scored expression) |
839585 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 17.9 | -4.2 | -4.3 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 15.4 | -4.5 | -3.5 | SRP365283 | SRR18430922 | Time-series RNAseq analysis following lateral root induction by gravistimulation |
| 14.2 | 2.5 | 5.7 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 13.5 | -3.0 | -4.5 | SRP091641 | SRR4426351 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.5 | -3.0 | -4.5 | SRP091641 | SRR4426947 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.5 | -3.0 | -4.5 | SRP091641 | SRR4426959 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.5 | -3.0 | -4.5 | SRP091641 | SRR4426353 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.5 | -3.0 | -4.5 | SRP091641 | SRR4426356 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.5 | -3.0 | -4.5 | SRP091641 | SRR4426949 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.2 | -5.4 | -2.4 | SRP220476 | SRR10072755 | Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants |
| 12.1 | -2.2 | -5.5 | SRP285119 | SRR12698770 | Time of day prioritizes the pool of translating mRNAs in response to heat stress |
| 11.8 | -2.6 | -4.6 | SRP083970 | SRR4115328 | The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq] |
| 11.5 | -3.1 | -3.7 | SRP150217 | SRR7289570 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.5 | 3.3 | 3.5 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.4 | -3.0 | -3.8 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 11.3 | -4.0 | -2.8 | SRP169564 | SRR8206423 | Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression |
| 11.1 | -2.2 | -5.1 | SRP100938 | SRR5304443 | During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight. |
| 11.0 | -3.4 | -3.3 | SRP101641 | SRR5330627 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 10.9 | -2.0 | -5.4 | SRP100712 | SRR5285543 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 10.8 | -2.3 | -4.8 | SRP220476 | SRR10072753 | Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants |
| 10.8 | -2.6 | -4.1 | SRP163044 | SRR7947080 | Global identification of Arabidopsis lncRNAs reveals the regulation of MAF4 by a natural antisense RNA |
| 10.5 | -1.9 | -5.6 | SRP073485 | SRR3401780 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 10.3 | -2.3 | -4.4 | ERP116123 | ERR3414877 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.3 | -2.3 | -4.4 | ERP116123 | ERR3414875 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.3 | -2.3 | -4.4 | ERP116123 | ERR3414876 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.3 | -2.3 | -4.4 | ERP116123 | ERR3414883 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.3 | -2.3 | -4.4 | ERP116123 | ERR3414906 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.3 | -2.3 | -4.4 | ERP116123 | ERR3414889 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.2 | -2.4 | -4.2 | SRP285380 | SRR12712240 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
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