CoexViewer
Coexpression detail for CYP98A3 and OMT1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | CYP98A3 | cytochrome P450, family 98, subfamily A, polypeptide 3 | 818686 | At2g40890 | 0.92 | 10.03 | 9.49 | 7.85 | 8.80 | 2.53 | 3.17 | 3.70 | 4.15 | 2.51 | 2.91 | |
| ath | OMT1 | O-methyltransferase 1 | 835504 | At5g54160 | 0.92 |
|
coex z = 9.4881 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 818686 (z-scored expression) |
835504 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 31.0 | -5.4 | -5.7 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 29.3 | -5.5 | -5.4 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 24.5 | 4.9 | 5.0 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 24.2 | 5.4 | 4.5 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 22.5 | -4.4 | -5.1 | SRP165731 | SRR8054358 | The embryonic transcriptome of Arabidopsis thaliana |
| 21.7 | -4.9 | -4.4 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 18.7 | -4.4 | -4.3 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 17.6 | 3.6 | 4.9 | SRP325022 | SRR14877257 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 16.8 | -4.7 | -3.5 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 16.0 | 4.3 | 3.8 | SRP277946 | SRR12470191 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 15.8 | 4.0 | 4.0 | SRP277946 | SRR12470192 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.6 | -3.7 | -3.9 | SRP297585 | SRR13239294 | mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos |
| 13.8 | 3.9 | 3.6 | SRP277946 | SRR12470193 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 13.7 | 3.8 | 3.6 | SRP254177 | SRR11429303 | Time course of brassinolide treatment on Arabidopsis seedlings |
| 13.3 | 3.6 | 3.7 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 13.1 | -3.5 | -3.7 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 12.9 | 3.6 | 3.6 | SRP277946 | SRR12469632 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.6 | 3.8 | 3.3 | SRP277946 | SRR12470188 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.0 | 3.7 | 3.2 | SRP277946 | SRR12470201 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.0 | 3.7 | 3.2 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 11.7 | 3.4 | 3.4 | SRP277946 | SRR12470189 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.4 | 3.4 | 3.4 | SRP220476 | SRR10072749 | Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants |
| 11.2 | 3.3 | 3.4 | SRP220476 | SRR10072747 | Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants |
| 11.0 | -3.3 | -3.3 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 11.0 | 3.3 | 3.3 | SRP220476 | SRR10072748 | Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants |
| 10.9 | -3.4 | -3.2 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 10.9 | -3.6 | -3.0 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 10.7 | -3.5 | -3.1 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 10.7 | -3.5 | -3.1 | SRP269252 | SRR12110257 | Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length |
| 10.7 | 3.3 | 3.3 | SRP277946 | SRR12470185 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.7 | -4.1 | -2.6 | ERP116123 | ERR3414638 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.7 | 3.4 | 3.2 | SRP346154 | SRR16948976 | Plants grow in lunar regolith |
| 10.6 | -3.0 | -3.6 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 10.6 | -3.7 | -2.9 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.5 | 3.4 | 3.1 | SRP285090 | SRR12697055 | Differential alteration of plant functions by homologous fungal candidate effectors |
| 10.5 | -3.3 | -3.2 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 10.4 | -3.3 | -3.1 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.4 | 3.1 | 3.3 | SRP051763 | SRR1744361 | Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data) |
| 10.3 | -3.3 | -3.1 | SRP050945 | SRR1696859 | Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana |
| 10.3 | -3.1 | -3.3 | SRP114806 | SRR5894583 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.2 | -3.2 | -3.2 | SRP126574 | SRR6369550 | Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis |
| 10.2 | -3.1 | -3.3 | SRP251246 | SRR11213957 | Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis |
| 10.1 | 5.1 | 2.0 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.0 | -3.2 | -3.2 | SRP285119 | SRR12698763 | Time of day prioritizes the pool of translating mRNAs in response to heat stress |
The preparation time of this page was 0.9 [sec].
