CoexViewer

Coexpression detail for CYP98A3 and 4CL1
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath CYP98A3 cytochrome P450, family 98, subfamily A, polypeptide 3 818686 At2g40890 0.92 15.65 15.19 11.87 3.90 1.21 3.31 4.22 5.78 1.74 7.17
ath 4CL1 4-coumarate:CoA ligase 1 841593 At1g51680 0.92
Platform:

coex z = 15.1915



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 818686
(z-scored expression)		 841593
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
31.0 -5.4 -5.7 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
29.3 -5.5 -5.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
26.9 5.4 5.0 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
26.6 5.1 5.2 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
23.7 -4.9 -4.8 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
21.7 -4.7 -4.7 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
20.8 4.9 4.2 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
20.1 -4.7 -4.2 ERP115370 ERR3333443 Arabidopsis tissue atlas
16.9 -4.4 -3.9 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.8 4.3 3.9 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.8 3.8 4.1 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
15.7 3.9 4.1 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
15.6 3.6 4.3 SRP114806 SRR5894660 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
14.6 3.6 4.1 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
14.1 3.9 3.7 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.0 4.0 3.5 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.2 3.7 3.5 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.9 -3.5 -3.7 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
12.3 3.7 3.3 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 3.8 3.2 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.1 -3.3 -3.7 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.1 -3.5 -3.4 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.0 -4.2 -2.9 ERP116123 ERR3414637 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.7 -4.1 -2.9 ERP116123 ERR3414638 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.7 3.6 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.5 -3.5 -3.3 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
11.4 -3.3 -3.4 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.4 3.4 3.4 SRP346154 SRR16948976 Plants grow in lunar regolith
11.3 3.4 3.3 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
11.3 -3.3 -3.4 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.2 3.4 3.3 SRP220476 SRR10072749 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
11.2 3.3 3.4 SRP220476 SRR10072747 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
11.1 3.3 3.3 SRP220476 SRR10072748 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
11.1 3.2 3.4 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.0 -3.7 -3.0 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.0 3.8 2.9 SRP282437 SRR12642118 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
10.9 -3.4 -3.3 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.9 3.2 3.4 SRP199288 SRR9113141 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
10.9 3.6 3.0 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 -3.3 -3.3 ERP116123 ERR3414641 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.6 -3.1 -3.4 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.6 -3.0 -3.6 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
10.5 -3.1 -3.4 SRP323348 SRR14766024 Differentially expressed transcriptomes of NADases mutant in Arabidopsis
10.3 3.3 3.1 SRP191093 SRR8859589 RNA-seq of the roots of Arabidopsis thaliana plants growing in soil treated under different fertilization regimes.
10.0 -3.1 -3.2 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
Note: Samples whose contribution is more than 10 are outputted.



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