CoexViewer

Coexpression detail for TPR15 and HVT1
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath TPR15 Heat shock protein DnaJ with tetratricopeptide repeat-containing protein 818750 At2g41520 0.67 8.07 8.47 5.49 107.20 1.44 2.64 1.45 1.38 0.81 4.64
ath HVT1 helicase in vascular tissue and tapetum 817631 At2g30800 0.67
Platform:

coex z = 8.4738



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 818750
(z-scored expression)		 817631
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
54.6 -7.6 -7.2 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
37.4 -5.9 -6.3 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
30.6 -5.5 -5.6 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
30.4 -5.5 -5.5 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
22.1 4.9 4.5 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
22.0 -4.9 -4.5 SRP229078 SRR10416643 Global transcriptomic analysis of Arabidopsis thaliana ecotype Columbia-0 subjected to magnesium deficiency
19.9 -4.4 -4.6 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
18.5 4.8 3.9 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
18.4 4.2 4.3 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
17.5 -3.9 -4.5 ERP116123 ERR3414638 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
17.4 -3.6 -4.8 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
16.9 -3.5 -4.9 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
16.8 -4.1 -4.1 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.4 -4.0 -4.1 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
15.7 -4.1 -3.9 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
15.7 -3.8 -4.1 SRP176451 SRR8404535 Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [RNA-seq]
15.7 -4.0 -4.0 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
15.3 3.9 3.9 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.2 -3.9 -3.9 SRP285090 SRR12697085 Differential alteration of plant functions by homologous fungal candidate effectors
14.9 4.2 3.5 SRP166137 SRR8078926 RNA-seq data on Botrytis treated Col-0, era1-2, snrk2.236 and lacs2.3 (Arabidopsis thaliana)
14.9 -3.9 -3.8 SRP103817 SRR5444474 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
14.8 3.9 3.8 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.5 -3.7 -3.9 SRP274404 SRR12356829 Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [w5C6]
14.2 -3.2 -4.4 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
13.6 -3.5 -3.9 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
13.5 3.8 3.5 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
13.5 3.6 3.8 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
13.4 -4.1 -3.3 SRP017386 SRR627679 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
13.4 3.6 3.7 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
13.4 -3.0 -4.4 SRP155742 SRR8699976 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
13.2 3.9 3.4 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.2 -3.7 -3.6 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
13.2 -3.6 -3.6 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.1 -3.9 -3.4 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
13.1 3.6 3.6 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
13.0 3.7 3.5 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.0 3.3 3.9 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.8 -3.2 -4.0 SRP257291 SRR11568018 Gene expression in Arabidopsis expressing a Hyaloperonospora arabidopsidis effector
12.8 3.7 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.8 -4.5 -2.8 SRP114806 SRR5894632 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.5 3.4 3.7 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.4 -3.8 -3.3 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
12.4 3.5 3.6 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 -3.5 -3.4 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
12.1 -3.3 -3.7 SRP272650 SRR12272429 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
12.1 -3.4 -3.5 ERP115370 ERR3333436 Arabidopsis tissue atlas
12.1 -3.8 -3.1 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.0 -3.7 -3.2 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
11.8 -3.6 -3.3 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
11.7 -4.2 -2.8 SRP100712 SRR5285678 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
11.6 3.5 3.4 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.6 -3.5 -3.3 SRP063017 SRR2221848 RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes
11.6 -3.1 -3.8 SRP220476 SRR10072739 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
11.6 -3.3 -3.5 SRP281951 SRR12620957 RNA-Seq experiment on Arabidopsis seedlings regarding SLIM1 and EIL1 function at low S
11.6 -3.7 -3.1 SRP150771 SRR7357980 RNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
11.5 3.4 3.4 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.5 -3.2 -3.7 SRP148699 SRR7204075 An essential role for Abscisic acid in the regulation of xylem fibre differentiation
11.5 3.4 3.4 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.3 3.3 3.4 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.2 -3.5 -3.2 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
11.0 -3.1 -3.5 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.9 3.2 3.4 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 -3.2 -3.4 SRP017386 SRR627685 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.8 -4.1 -2.7 SRP039091 SRR1179987 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.7 3.1 3.5 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.7 3.4 3.1 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.6 3.0 3.5 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 3.4 3.1 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 -3.6 -2.9 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.5 -3.3 -3.2 SRP145580 SRR7160920 Gene expression responses to ABA and to osmotic stress in the pyl112458 379101112 mutant
10.3 -4.3 -2.4 SRP267337 SRR12014974 Transcriptome analysis of Arabidopsis thaliana shoots and roots, exposed to PEG-induced osmotic shock, PEG+Histidine, PEG+SHAM [20191204_130529_uLox_PEG_Shock]
10.2 3.0 3.4 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -3.3 -3.1 ERP116123 ERR3414637 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.1 -2.8 -3.5 ERP118109 ERR3624433 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
10.1 -4.0 -2.5 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
10.1 -3.3 -3.0 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.0 -2.8 -3.6 SRP277946 SRR12469806 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 -3.0 -3.4 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.0 -3.5 -2.9 SRP372716 SRR18963423 Interpreting gene co-regulation and metabolic profiling in the unique starch metabolism of Arabidopsis dpe2/phs1 mutant reveals insights into control mechanism of the starch granule number
10.0 3.2 3.1 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
Note: Samples whose contribution is more than 10 are outputted.



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