CoexViewer

Coexpression detail for AT2G41710 and AT5G18210
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT2G41710 Integrase-type DNA-binding superfamily protein 818770 At2g41710 0.65 5.18 5.03 3.92 4.80 2.15 3.20 3.59 2.53 2.46 3.41
ath AT5G18210 NAD(P)-binding Rossmann-fold superfamily protein 831939 At5g18210 0.65
Platform:

coex z = 5.0318



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 818770
(z-scored expression)		 831939
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
47.7 -6.9 -6.9 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
30.2 -4.6 -6.5 ERP115370 ERR3333443 Arabidopsis tissue atlas
25.0 -5.1 -4.9 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
21.4 -4.3 -5.0 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
20.4 -5.1 -4.0 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
19.2 -5.1 -3.7 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
18.3 -4.7 -3.9 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
16.0 -4.0 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
15.4 -4.6 -3.4 SRP165731 SRR8054399 The embryonic transcriptome of Arabidopsis thaliana
15.4 -3.1 -5.0 SRP091641 SRR4426941 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
15.4 -3.8 -4.0 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
14.9 -4.8 -3.1 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
14.5 -2.2 -6.6 ERP116123 ERR3414875 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
14.1 -3.8 -3.7 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
14.0 -3.9 -3.6 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.0 -2.3 -6.0 SRP189792 SRR8800716 Role of AtMLKLs in response to powdery mildew fungus
13.8 4.0 3.5 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.7 -3.0 -4.6 SRP337622 SRR15931267 Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency
13.5 -3.3 -4.0 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.8 -3.4 -3.7 SRP277946 SRR12469603 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.6 -3.0 -4.2 SRP137763 SRR6950029 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
12.5 3.6 3.5 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.5 -2.9 -4.3 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.4 -3.5 -3.6 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.2 -3.9 -3.1 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
12.1 -6.6 -1.8 SRP267137 SRR12005735 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
12.0 -3.6 -3.3 SRP091641 SRR4426949 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.8 -3.6 -3.3 ERP118109 ERR3624352 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 -2.2 -5.3 SRP114806 SRR5894775 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.3 -3.0 -3.8 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
10.9 -2.4 -4.5 SRP155742 SRR8699976 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.8 -3.2 -3.4 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
10.8 -3.8 -2.8 SRP238084 SRR10733479 Cellular trajectory analysis links tissue maturation to cellular specialization in the plant meristem [protophloem sieve element cells]
10.6 -3.8 -2.8 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.6 3.3 3.2 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.5 3.4 3.1 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.5 3.4 3.1 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.3 -2.3 -4.5 SRP155742 SRR7620856 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.2 3.4 3.0 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.2 -2.5 -4.1 SRP150217 SRR7289598 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.0 3.7 2.7 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
Note: Samples whose contribution is more than 10 are outputted.



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