CoexViewer
Coexpression detail for ZFP8 and CGA1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | ZFP8 | zinc finger protein 8 | 818794 | At2g41940 | 0.42 | 7.12 | 6.33 | 6.00 | 817.80 | 3.07 | 1.93 | 1.67 | 1.57 | 0.57 | 4.92 | |
| ath | CGA1 | cytokinin-responsive gata factor 1 | 828721 | At4g26150 | 0.42 |
|
coex z = 6.3288 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 818794 (z-scored expression) |
828721 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 24.5 | -5.7 | -4.3 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 17.3 | 5.4 | 3.2 | SRP285902 | SRR12747402 | Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis |
| 15.9 | 3.4 | 4.7 | SRP100064 | SRR5262986 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 15.0 | 3.9 | 3.8 | SRP126574 | SRR6369360 | Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis |
| 14.7 | -3.5 | -4.2 | SRP090459 | SRR4296015 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI] |
| 14.7 | 4.5 | 3.2 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.4 | 4.2 | 3.4 | SRP277946 | SRR12470193 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.2 | -4.0 | -3.5 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 13.6 | 4.0 | 3.4 | SRP277946 | SRR12470192 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 13.3 | 4.2 | 3.2 | SRP285902 | SRR12747405 | Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis |
| 12.9 | -2.9 | -4.5 | SRP091641 | SRR4426614 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.8 | -4.1 | -3.2 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 12.2 | -3.4 | -3.6 | SRP277946 | SRR12469603 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.8 | -3.2 | -3.7 | SRP090459 | SRR4296016 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI] |
| 11.6 | 3.2 | 3.6 | SRP277946 | SRR12470191 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.5 | -3.1 | -3.7 | SRP266133 | SRR11934605 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 11.5 | -3.1 | -3.7 | SRP266133 | SRR11934572 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 11.3 | 2.5 | 4.5 | SRP100064 | SRR5262981 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 11.2 | 3.2 | 3.5 | SRP277946 | SRR12470208 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.6 | -4.4 | -2.4 | SRP114806 | SRR5894639 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.2 | 3.4 | 3.0 | SRP095347 | SRR5120422 | Genetic influences on gene expression in Arabidopsis thaliana |
| 10.1 | -3.2 | -3.1 | SRP097877 | SRR5205781 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
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