CoexViewer
Coexpression detail for AT2G42110 and TPX2
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT2G42110 | uncharacterized protein | 818811 | At2g42110 | 0.14 | 8.62 | 6.98 | 7.92 | 47.40 | 3.07 | 3.47 | 1.09 | 1.11 | 0.69 | 4.67 | |
| ath | TPX2 | targeting protein for XKLP2 | 839140 | At1g03780 | 0.14 |
|
coex z = 6.9773 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 818811 (z-scored expression) |
839140 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 31.7 | -4.8 | -6.6 | SRP100064 | SRR5263234 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 23.7 | -3.8 | -6.2 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 19.9 | -6.4 | -3.1 | SRP187381 | SRR8662285 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 19.4 | -4.9 | -4.0 | SRP277946 | SRR12469718 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 19.1 | -4.0 | -4.8 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 18.9 | -2.8 | -6.6 | SRP100064 | SRR5263232 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 18.9 | -2.8 | -6.6 | SRP100064 | SRR5263235 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 17.1 | -4.7 | -3.6 | SRP214585 | SRR9681271 | Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins |
| 14.8 | -4.0 | -3.7 | ERP118500 | ERR3668650 | Transcription profiling of Arabidopsis thaliana leaves as reaction to caterpillar (Trichoplusia ni) feeding and fungi (Laccaria bicolor) infection of the roots |
| 14.7 | -7.1 | -2.1 | SRP187062 | SRR8645808 | Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis |
| 14.7 | -4.9 | -3.0 | SRP277946 | SRR12469950 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.4 | 5.3 | 2.7 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 14.2 | -5.0 | -2.8 | SRP044776 | SRR1523942 | High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade |
| 13.5 | -4.9 | -2.7 | SRP277946 | SRR12469644 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 13.5 | 5.1 | 2.6 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 13.3 | -4.1 | -3.3 | SRP151058 | SRR7408198 | botrytisxn - Nitrogen nutrition and pathogen susceptibility: priming by metabolism. |
| 13.1 | -3.3 | -4.0 | SRP237340 | SRR10677198 | MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis |
| 12.8 | -4.2 | -3.1 | SRP126872 | SRR6381398 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
| 12.7 | -1.9 | -6.6 | SRP100064 | SRR5263228 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 12.5 | -4.7 | -2.7 | SRP214585 | SRR9681427 | Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins |
| 12.5 | -2.9 | -4.4 | SRP191093 | SRR8859574 | RNA-seq of the roots of Arabidopsis thaliana plants growing in soil treated under different fertilization regimes. |
| 12.5 | -4.9 | -2.5 | SRP277946 | SRR12469581 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.1 | -3.2 | -3.8 | SRP050945 | SRR1696837 | Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana |
| 11.9 | -2.2 | -5.5 | SRP017386 | SRR627679 | Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings |
| 11.7 | -3.0 | -3.9 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 11.7 | -3.2 | -3.6 | SRP285380 | SRR12712240 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 11.7 | -3.2 | -3.6 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 11.7 | -3.2 | -3.6 | SRP285380 | SRR12712264 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 11.3 | -2.6 | -4.4 | SRP100712 | SRR5285666 | Plant development on ISS differes from the development on the ground and is influenced by the genetic background. |
| 11.3 | -4.0 | -2.8 | SRP083970 | SRR4115297 | The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq] |
| 11.0 | -3.4 | -3.2 | SRP148498 | SRR7187196 | A regulatory module controls plant growth and stress response by modulating hormone level |
| 10.7 | -3.2 | -3.3 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 10.6 | -4.9 | -2.2 | SRP277946 | SRR12470177 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.4 | -4.2 | -2.5 | SRP108261 | SRR5627270 | RNAseq data for Arabidopsis TF mutants during germination |
| 10.4 | -4.7 | -2.2 | SRP214585 | SRR9681286 | Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins |
| 10.4 | -4.7 | -2.2 | SRP214585 | SRR9681416 | Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins |
| 10.3 | -3.2 | -3.2 | SRP187156 | SRR8648403 | Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection |
| 10.2 | -3.8 | -2.7 | SRP136812 | SRR6919649 | The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel] |
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