CoexViewer

Coexpression detail for PDF1 and AT5G45670
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath PDF1 protodermal factor 1 818884 At2g42840 0.74 13.54 12.55 10.88 1.40 3.06 5.19 2.79 3.73 0.95 9.30
ath AT5G45670 GDSL-like Lipase/Acylhydrolase superfamily protein 834606 At5g45670 0.74
Platform:

coex z = 12.5477



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 818884
(z-scored expression)		 834606
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
43.9 4.1 10.8 SRP100064 SRR5263190 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
35.2 4.0 8.7 SRP100064 SRR5263192 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
34.6 -6.2 -5.6 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
29.1 3.3 8.7 SRP100064 SRR5263046 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
22.5 -4.6 -4.9 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
21.1 5.0 4.3 ERP118109 ERR3624471 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
17.7 4.2 4.2 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
16.0 3.8 4.2 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
15.8 -2.8 -5.6 SRP214585 SRR9681415 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
14.3 -4.1 -3.5 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
14.0 3.5 4.0 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.8 -3.6 -3.5 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
12.5 3.5 3.6 SRP220476 SRR10072710 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
12.1 -3.7 -3.3 SRP114806 SRR5894632 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.1 -3.5 -3.5 SRP073485 SRR3401785 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
11.9 -3.3 -3.6 ERP015521 ERR1406265 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
11.8 -2.8 -4.2 SRP090458 SRR4295949 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
11.5 -3.9 -2.9 SRP050945 SRR1696837 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
11.4 3.5 3.3 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 -3.6 -3.1 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.2 -3.2 -3.5 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
11.1 -2.1 -5.2 SRP277946 SRR12470034 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -3.4 -3.2 SRP227251 SRR10356211 Expression data from Arabidopsis thaliana Col-0 transformed with constructs misexpressing NAC052 transcription factor involving leaf morphology and anatomy
10.5 -3.0 -3.5 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.3 -3.6 -2.9 SRP114806 SRR5894494 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.1 -3.3 -3.1 SRP201662 SRR9312956 Tissue specific light response during Arabidopsis de-etiolation
10.0 -3.2 -3.1 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
Note: Samples whose contribution is more than 10 are outputted.



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