CoexViewer

Coexpression detail for AT2G45250 and AMSH2
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath AT2G45250 integral membrane hemolysin-III-like protein 819133 At2g45250 0.65 6.49 6.98 1.35
ath AMSH2 associated molecule with the SH3 domain of STAM 2 837603 At1g10600 0.65
Platform:

coex z = 6.9773



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 819133
(z-scored expression)		 837603
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
35.7 -6.8 -5.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
27.1 -4.8 -5.7 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
25.0 -4.9 -5.1 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
21.9 -5.3 -4.2 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
20.4 -4.4 -4.6 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
19.2 -4.4 -4.4 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
18.0 -4.7 -3.8 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
17.6 -4.3 -4.0 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
16.1 -4.1 -3.9 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
15.7 -4.3 -3.7 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
15.5 -2.8 -5.5 SRP155742 SRR8699976 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
15.4 -3.8 -4.1 SRP334993 SRR15679198 Next Generation Sequencing Facillitates Quantitative Analysis of Wild Type and snrk1a1/a2 mutant Transcriptomes
14.5 -3.8 -3.8 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
13.5 -2.6 -5.2 SRP100712 SRR5285650 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
13.4 -3.5 -3.8 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
13.2 3.7 3.6 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
13.1 -3.8 -3.4 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
13.0 -2.7 -4.8 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
12.8 4.0 3.2 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.7 3.8 3.4 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.7 -3.3 -3.8 ERP116123 ERR3414876 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
12.7 -3.7 -3.4 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
12.7 -3.4 -3.7 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
12.6 3.6 3.5 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
12.5 3.5 3.6 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.5 -3.6 -3.5 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
12.5 3.6 3.5 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.2 -3.2 -3.8 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.1 -3.8 -3.2 SRP272650 SRR12272429 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
11.9 -2.8 -4.2 SRP360225 SRR18054364 RNAseq analysis of Arabidopsis thaliana apices of Col-0, ap2-12 and rAP2-VENUS plants at 1-cm bolting stage
11.9 3.4 3.5 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 3.5 3.4 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.6 -3.8 -3.0 SRP102178 SRR5360867 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.4 -3.5 -3.2 SRP145580 SRR7160920 Gene expression responses to ABA and to osmotic stress in the pyl112458 379101112 mutant
11.4 4.0 2.8 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
11.4 3.5 3.3 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.3 3.4 3.3 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.3 -2.8 -4.0 SRP285119 SRR12698780 Time of day prioritizes the pool of translating mRNAs in response to heat stress
11.0 -3.8 -2.9 SRP119072 SRR6113963 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
11.0 -3.5 -3.2 SRP018034 SRR2079771 Time-course transcriptome of wild-type Arabidopsis leaf
10.8 -3.2 -3.4 ERP123539 ERR4471734 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.8 -3.2 -3.4 ERP123539 ERR4471735 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.6 -2.9 -3.6 SRP104119 SRR5452971 Time course of the Arabidopsis thaliana root meristem
10.6 -3.6 -2.9 SRP286047 SRR12762107 The impact of the genes BBX32 and HY5 on the high light - responsive transcriptome of Arabidopsis thaliana
10.5 -3.3 -3.2 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
10.5 -3.6 -2.9 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
10.4 -3.4 -3.1 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.4 -3.1 -3.4 SRP090457 SRR4295748 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
10.4 -3.3 -3.1 SRP148699 SRR7204075 An essential role for Abscisic acid in the regulation of xylem fibre differentiation
10.3 3.6 2.9 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -3.9 -2.6 SRP100064 SRR5263053 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.2 3.0 3.4 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
10.2 2.5 4.1 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
10.2 -3.2 -3.1 ERP115370 ERR3333439 Arabidopsis tissue atlas
10.1 -3.4 -3.0 SRP297920 SRR13253061 Transcript analysis under phosphate and iron deprivation in 7 day old Arabidopsis thaliana seedlings
10.0 -3.0 -3.4 SRP119072 SRR6113964 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
10.0 -3.0 -3.4 ERP115370 ERR3333437 Arabidopsis tissue atlas
Note: Samples whose contribution is more than 10 are outputted.



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