CoexViewer
Coexpression detail for ATL6 and WRKY33
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | ATL6 | RING/U-box superfamily protein | 819684 | At3g05200 | 0.78 | 5.38 | 4.77 | 4.53 | 3.20 | 3.05 | 5.08 | 3.42 | 4.58 | 1.72 | 5.28 | |
| ath | WRKY33 | WRKY DNA-binding protein 33 | 818429 | At2g38470 | 0.78 |
|
coex z = 4.7658 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 819684 (z-scored expression) |
818429 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 26.6 | -5.3 | -5.0 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 20.4 | 4.6 | 4.4 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 19.5 | 4.5 | 4.3 | ERP123539 | ERR4471741 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 18.2 | 4.5 | 4.1 | SRP112501 | SRR5831044 | Combining chemical and genetic approaches to increase drought resistance in plants |
| 17.8 | -5.2 | -3.4 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 16.9 | 4.3 | 3.9 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 14.7 | -3.7 | -4.0 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 14.3 | -4.6 | -3.1 | SRP165731 | SRR8054398 | The embryonic transcriptome of Arabidopsis thaliana |
| 14.1 | 3.5 | 4.1 | SRP279501 | SRR12558734 | Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration |
| 13.1 | 4.8 | 2.7 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 12.7 | 3.7 | 3.4 | SRP230790 | SRR10502568 | H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq] |
| 12.0 | 3.8 | 3.2 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 11.8 | 4.6 | 2.6 | SRP114806 | SRR5894659 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 11.8 | -3.8 | -3.1 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 11.3 | -3.2 | -3.5 | SRP266133 | SRR11934625 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 11.2 | -3.7 | -3.1 | SRP266133 | SRR11934479 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 11.2 | -3.5 | -3.2 | SRP266133 | SRR11934588 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 11.0 | 3.3 | 3.3 | SRP285090 | SRR12697055 | Differential alteration of plant functions by homologous fungal candidate effectors |
| 11.0 | -3.3 | -3.3 | SRP073487 | SRR3401835 | Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant. |
| 10.9 | 3.4 | 3.2 | SRP325022 | SRR14877257 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 10.8 | 3.8 | 2.8 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.7 | -3.3 | -3.2 | SRP173260 | SRR8310903 | Functional relationship of GUN1 and FUG1 in plastid proteostasis |
| 10.6 | 3.2 | 3.4 | SRP101641 | SRR5330630 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 10.2 | -4.1 | -2.5 | SRP238084 | SRR10733480 | Cellular trajectory analysis links tissue maturation to cellular specialization in the plant meristem [protophloem sieve element cells] |
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