CoexViewer
Coexpression detail for ATL6 and EXO70B1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | ATL6 | RING/U-box superfamily protein | 819684 | At3g05200 | 0.78 | 5.73 | 5.45 | 4.45 | 6.00 | 1.81 | 3.12 | 4.97 | 5.25 | 1.56 | 6.11 | |
| ath | EXO70B1 | exocyst subunit exo70 family protein B1 | 835956 | At5g58430 | 0.78 |
|
coex z = 5.4475 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 819684 (z-scored expression) |
835956 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 29.6 | -5.2 | -5.6 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 29.3 | -5.3 | -5.5 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 22.7 | -4.1 | -5.5 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 19.9 | 4.8 | 4.1 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 19.0 | 4.5 | 4.3 | SRP112501 | SRR5831044 | Combining chemical and genetic approaches to increase drought resistance in plants |
| 18.5 | 4.6 | 4.0 | SRP114806 | SRR5894659 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 17.6 | 4.6 | 3.8 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 17.1 | 4.3 | 4.0 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 16.8 | 4.5 | 3.7 | ERP123539 | ERR4471741 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 15.9 | 3.8 | 4.1 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 15.5 | -3.9 | -4.0 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 14.3 | 3.8 | 3.8 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 13.7 | -3.8 | -3.6 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 13.3 | -3.5 | -3.8 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 13.2 | 3.4 | 3.9 | SRP277946 | SRR12470192 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 13.1 | 3.4 | 3.8 | SRP277946 | SRR12470208 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.6 | 3.4 | 3.7 | SRP325022 | SRR14877257 | Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells |
| 12.4 | -3.7 | -3.4 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 12.4 | -3.5 | -3.6 | SRP169564 | SRR8206413 | Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression |
| 12.3 | -3.7 | -3.3 | SRP039091 | SRR1179987 | Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource |
| 11.5 | -3.0 | -3.8 | SRP039091 | SRR1179986 | Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource |
| 11.4 | -3.6 | -3.2 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 11.4 | 3.1 | 3.7 | SRP277946 | SRR12469632 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.2 | 3.3 | 3.3 | SRP285090 | SRR12697055 | Differential alteration of plant functions by homologous fungal candidate effectors |
| 11.0 | 3.1 | 3.6 | SRP136812 | SRR6919642 | The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel] |
| 11.0 | -3.3 | -3.3 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 10.9 | 3.7 | 2.9 | SRP230790 | SRR10502568 | H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq] |
| 10.9 | -3.1 | -3.5 | SRP285380 | SRR12712238 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 10.6 | -4.6 | -2.3 | SRP165731 | SRR8054398 | The embryonic transcriptome of Arabidopsis thaliana |
| 10.5 | 3.5 | 3.1 | SRP277946 | SRR12470189 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.4 | 3.1 | 3.3 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 10.3 | -3.3 | -3.1 | SRP173260 | SRR8310903 | Functional relationship of GUN1 and FUG1 in plastid proteostasis |
| 10.3 | 2.1 | 4.9 | SRP282437 | SRR12642275 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
| 10.3 | -3.1 | -3.3 | SRP093913 | SRR5054306 | Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis |
| 10.3 | -3.3 | -3.1 | SRP073487 | SRR3401835 | Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant. |
| 10.2 | -3.7 | -2.8 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
The preparation time of this page was 0.9 [sec].
