CoexViewer

Coexpression detail for ATL6 and NSL1
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath ATL6 RING/U-box superfamily protein 819684 At3g05200 0.78 3.40 3.25 2.62 33.00 2.11 2.66 2.94 3.96 1.80 2.29
ath NSL1 MAC/Perforin domain-containing protein 839735 At1g28380 0.78
Platform:

coex z = 3.2526



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 819684
(z-scored expression)		 839735
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
28.9 -5.3 -5.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.9 -4.1 -6.0 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
23.9 -5.2 -4.6 ERP115370 ERR3333443 Arabidopsis tissue atlas
18.9 3.8 4.9 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
17.9 4.6 3.9 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
17.1 -4.6 -3.8 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
17.1 -3.8 -4.5 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
17.0 -3.9 -4.3 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.7 4.5 3.7 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
16.5 4.5 3.6 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
15.4 3.4 4.5 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.6 4.3 3.4 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.5 -2.6 -5.3 SRP100064 SRR5263229 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
13.1 3.8 3.4 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.1 3.1 4.2 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.0 -3.7 -3.6 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
12.9 -2.5 -5.3 SRP100064 SRR5263028 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
12.6 -3.7 -3.4 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.6 4.8 2.6 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.5 3.3 3.8 SRP277946 SRR12470073 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 3.4 3.6 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
12.2 3.3 3.6 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
12.1 4.6 2.6 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.9 -3.5 -3.4 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.7 -3.3 -3.5 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
11.1 -3.1 -3.6 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
11.1 -3.0 -3.7 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.9 -2.7 -4.0 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
10.8 -3.5 -3.1 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.6 -3.5 -3.1 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.6 -2.9 -3.6 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.4 -3.3 -3.1 SRP073487 SRR3401835 Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
10.3 -2.0 -5.3 SRP100064 SRR5263228 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.3 -3.5 -2.9 SRP266133 SRR11934588 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.3 3.1 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.2 3.2 3.2 SRP101641 SRR5330630 Chloroplast signalling gates thermotolerance in Arabidopsis
10.2 3.1 3.3 SRP136812 SRR6919642 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
10.0 -3.2 -3.1 SRP065994 SRR2932456 Identification of plant vacuolar transporters mediating phosphate storage
Note: Samples whose contribution is more than 10 are outputted.



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