CoexViewer

Coexpression detail for AT3G06780 and AT3G02340
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT3G06780 glycine-rich protein 819863 At3g06780 0.44 7.63 8.59 4.60 5.80 3.78 2.92 2.78 3.94 2.01 3.39
ath AT3G02340 RING/U-box superfamily protein 821090 At3g02340 0.44
Platform:

coex z = 8.5902



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 819863
(z-scored expression)		 821090
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
34.6 -6.1 -5.7 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
30.0 -4.8 -6.2 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
26.1 -4.9 -5.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
18.9 -4.4 -4.3 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
18.8 4.3 4.3 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
17.4 -3.9 -4.5 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
15.1 3.9 3.9 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
14.8 -3.5 -4.2 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
14.4 -3.5 -4.1 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.0 -3.9 -3.6 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
13.8 4.0 3.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.8 -3.9 -3.6 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
13.4 -3.5 -3.8 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
13.4 -3.8 -3.5 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.3 3.4 3.9 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.9 -3.6 -3.6 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.6 -3.9 -3.2 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
12.4 -4.8 -2.6 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
12.3 -3.4 -3.6 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.2 -3.6 -3.4 SRP073485 SRR3401812 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
12.2 -5.4 -2.3 SRP100938 SRR5304820 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
12.0 -3.8 -3.1 SRP345854 SRR16934651 Phytochrome B regulates reactive oxygen signaling during stress in plants.
11.8 3.2 3.6 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.6 -2.9 -4.0 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
11.5 -2.3 -4.9 SRP132865 SRR6726417 Molecular basis of flowering under natural long-day conditions in Arabidopsis
11.5 3.4 3.4 SRP070918 SRR3193434 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
11.2 3.1 3.6 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.2 -3.4 -3.3 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.9 -3.5 -3.1 SRP257480 SRR11573268 Relevance of Unfolded Protein Response to Spaceflight-Induced Transcriptional Reprogramming in Arabidopsis
10.7 3.0 3.5 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.7 -5.4 -2.0 SRP100938 SRR5304987 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.6 -2.8 -3.7 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
10.6 -3.3 -3.2 SRP277946 SRR12470077 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -3.0 -3.5 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.6 3.0 3.6 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 -3.1 -3.4 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
10.5 -3.0 -3.5 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.4 -3.1 -3.4 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.2 2.6 3.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.0 3.0 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
Note: Samples whose contribution is more than 10 are outputted.



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