CoexViewer

Coexpression detail for AT3G10080 and AT2G28410
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT3G10080 RmlC-like cupins superfamily protein 820169 At3g10080 0.42 11.30 9.32 10.21 2.50 5.72 4.66 3.97 3.23 2.14 1.19
ath AT2G28410 uncharacterized protein 817389 At2g28410 0.42
Platform:

coex z = 9.3218



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 820169
(z-scored expression)		 817389
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
46.4 7.0 6.6 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
29.8 -5.4 -5.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
22.3 -4.7 -4.8 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
20.7 -3.7 -5.6 SRP220476 SRR10072754 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
17.0 -3.9 -4.3 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
16.5 -3.9 -4.2 SRP125388 SRR6312346 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
15.9 -3.7 -4.3 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
15.6 -4.4 -3.5 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
15.0 4.2 3.6 SRP021196 SRR1610503 RNA-Seq of single cells from the Arabidopsis root
15.0 -3.8 -4.0 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.8 -2.7 -5.5 ERP116123 ERR3414914 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
14.4 -3.7 -4.0 SRP279501 SRR12558734 Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration
14.4 -3.4 -4.2 SRP159259 SRR7774155 Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress.
14.3 -4.4 -3.3 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
13.5 3.7 3.6 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.1 -2.6 -5.0 SRP091641 SRR4426511 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
13.1 -3.7 -3.6 SRP101641 SRR5330623 Chloroplast signalling gates thermotolerance in Arabidopsis
12.7 3.2 3.9 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.6 -3.7 -3.4 SRP229078 SRR10416613 Global transcriptomic analysis of Arabidopsis thaliana ecotype Columbia-0 subjected to magnesium deficiency
12.4 3.4 3.7 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.1 -3.6 -3.3 SRP050945 SRR1696837 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
11.7 -3.3 -3.6 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.7 -4.3 -2.7 SRP324081 SRR14813614 ARATH-IN-OUT
11.7 -4.3 -2.7 SRP362867 SRR18254736 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
11.6 -2.8 -4.2 SRP101641 SRR5330634 Chloroplast signalling gates thermotolerance in Arabidopsis
11.6 -2.1 -5.5 ERP116123 ERR3414876 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.4 -3.7 -3.1 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
11.3 -3.0 -3.8 SRP346154 SRR16948976 Plants grow in lunar regolith
11.2 3.5 3.2 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.1 -3.6 -3.1 SRP104760 SRR5467210 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
11.0 -2.5 -4.4 SRP279325 SRR12546084 Coordination of microbe-host homeostasis via a crosstalk with plant innate immunity
11.0 -3.3 -3.3 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
11.0 3.4 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.9 -2.8 -3.9 SRP163134 SRR7954867 Transcriptional charecterization of the eds4 mutant transcriptome
10.7 -3.2 -3.4 SRP237550 SRR10691727 Transcriptome profiling of inflorescence stem tissues from Arabidopsis thaliana series 1
10.6 2.8 3.8 SRP151817 SRR7465450 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
10.5 -3.1 -3.4 SRP101641 SRR5330627 Chloroplast signalling gates thermotolerance in Arabidopsis
10.5 -3.7 -2.8 SRP272650 SRR12272425 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
10.4 -4.0 -2.6 SRP109649 SRR5712408 Transcriptome profiling of mutants of CALMODULIN-LIKE (CML) family genes and CALMODULIN-BINDING PROTEIN 60 (CBP60) family genes in response to Pseudomonas syringae pv maculicola ES4326
10.2 -3.6 -2.8 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
Note: Samples whose contribution is more than 10 are outputted.



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