CoexViewer
Coexpression detail for AT3G10080 and AT3G27200
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT3G10080 | RmlC-like cupins superfamily protein | 820169 | At3g10080 | 0.42 | 5.34 | 4.58 | 4.66 | 489.10 | 0.06 | 1.49 | 1.23 | 2.52 | 1.57 | 2.86 | |
| ath | AT3G27200 | Cupredoxin superfamily protein | 822339 | At3g27200 | 0.42 |
|
coex z = 4.5829 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 820169 (z-scored expression) |
822339 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 49.5 | 7.0 | 7.1 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 34.2 | -5.4 | -6.3 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 24.0 | -3.9 | -6.1 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 18.8 | -4.1 | -4.6 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 17.6 | -4.4 | -4.0 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 17.1 | -4.4 | -3.8 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 15.5 | 3.2 | 4.8 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 14.7 | -3.8 | -3.9 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 14.1 | -3.7 | -3.8 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 14.0 | -3.6 | -3.9 | SRP050945 | SRR1696837 | Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana |
| 13.4 | -3.3 | -4.1 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 13.4 | -2.8 | -4.8 | SRP201971 | SRR9331189 | RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types |
| 12.4 | -4.7 | -2.7 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 12.0 | -3.7 | -3.2 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 11.0 | -2.7 | -4.1 | SRP271641 | SRR12211736 | Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold |
| 11.0 | 3.0 | 3.7 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.8 | -3.2 | -3.3 | SRP145580 | SRR7160920 | Gene expression responses to ABA and to osmotic stress in the pyl112458 379101112 mutant |
| 10.8 | 3.4 | 3.2 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 10.7 | -3.2 | -3.3 | SRP150217 | SRR7289570 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.5 | 3.7 | 2.8 | SRP277946 | SRR12470193 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.2 | -3.6 | -2.8 | SRP104760 | SRR5467210 | Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant |
| 10.1 | -3.9 | -2.6 | SRP125388 | SRR6312346 | Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration |
| 10.1 | -3.9 | -2.6 | SRP125388 | SRR6312356 | Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration |
| 10.1 | -3.0 | -3.3 | SRP187156 | SRR8648403 | Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection |
| 10.0 | -3.0 | -3.3 | ERP115370 | ERR3333441 | Arabidopsis tissue atlas |
| 10.0 | -3.0 | -3.3 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 10.0 | -3.0 | -3.3 | ERP115370 | ERR3333442 | Arabidopsis tissue atlas |
The preparation time of this page was 0.8 [sec].
