CoexViewer
Coexpression detail for AT3G10190 and AT1G78880
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|
| ath | AT3G10190 | Calcium-binding EF-hand family protein | 820181 | At3g10190 | 0.38 | 3.04 | 3.19 | 1.07 | |
| ath | AT1G78880 | Ubiquitin-specific protease family C19-related protein | 844225 | At1g78880 | 0.38 |
|
coex z = 3.1861 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 820181 (z-scored expression) |
844225 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 40.4 | -5.5 | -7.4 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 26.6 | -4.0 | -6.7 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 21.9 | -3.9 | -5.7 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 16.2 | -3.9 | -4.2 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 16.1 | -3.6 | -4.5 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 15.5 | -4.4 | -3.5 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 15.2 | -3.7 | -4.2 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 13.2 | -3.8 | -3.5 | SRP279454 | SRR12554216 | RNA-seq analysis of WT, aipp3, aipp2, paipp2, aipp2/paipp2, cpl2, lhp1, and clf in Arabidopsis |
| 12.9 | 3.3 | 3.9 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 12.2 | -3.1 | -4.0 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 12.2 | 3.4 | 3.5 | SRP017386 | SRR627642 | Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings |
| 12.1 | -3.7 | -3.3 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 12.1 | 3.0 | 4.1 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 11.6 | -3.6 | -3.2 | SRP091641 | SRR4426959 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 11.1 | -2.9 | -3.8 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 11.0 | 3.3 | 3.3 | SRP017386 | SRR627641 | Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings |
| 11.0 | -3.9 | -2.8 | SRP101641 | SRR5330623 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 10.9 | -3.1 | -3.5 | SRP251246 | SRR11213957 | Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis |
| 10.8 | 3.3 | 3.3 | SRP365283 | SRR18430906 | Time-series RNAseq analysis following lateral root induction by gravistimulation |
| 10.8 | 3.0 | 3.5 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 10.6 | -4.2 | -2.5 | ERP116123 | ERR3414875 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.5 | -3.6 | -3.0 | SRP297585 | SRR13239294 | mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos |
| 10.5 | -3.6 | -2.9 | SRP362867 | SRR18254735 | Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses |
| 10.5 | -3.6 | -2.9 | SRP324081 | SRR14813615 | ARATH-IN-OUT |
| 10.5 | -3.2 | -3.2 | SRP297920 | SRR13253061 | Transcript analysis under phosphate and iron deprivation in 7 day old Arabidopsis thaliana seedlings |
| 10.4 | 2.9 | 3.6 | SRP277946 | SRR12470188 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
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