CoexViewer

Coexpression detail for AT3G10250 and AT1G15740
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT3G10250 histidine-tRNA ligase 820187 At3g10250 0.64 6.66 5.81 5.71 4.50 2.02 4.22 3.15 2.46 3.45 4.41
ath AT1G15740 Leucine-rich repeat family protein 838143 At1g15740 0.64
Platform:

coex z = 5.8133



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 820187
(z-scored expression)		 838143
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
31.7 -7.3 -4.3 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
26.4 -5.3 -4.9 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
19.6 -4.1 -4.8 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
19.1 -4.7 -4.1 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
18.9 -4.9 -3.9 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
17.0 4.0 4.2 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
16.7 -3.8 -4.4 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
15.4 -4.2 -3.7 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.1 4.9 2.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.7 -3.6 -3.8 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
13.6 3.8 3.6 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.4 3.5 3.9 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
13.0 -4.4 -2.9 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
12.9 4.1 3.1 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.8 -3.0 -4.3 ERP115370 ERR3333443 Arabidopsis tissue atlas
12.8 -3.7 -3.5 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
11.9 -3.5 -3.4 SRP069198 SRR3139508 The SnRK1-eIFiso4G1 signaling relay regulates the translation of specific mRNAs in Arabidopsis under submergence
11.9 -3.7 -3.2 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.9 -3.4 -3.5 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.8 -3.7 -3.2 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
11.4 3.5 3.3 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 -3.2 -3.5 SRP073485 SRR3401814 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
11.2 3.2 3.5 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 3.3 3.4 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 3.3 3.3 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
10.7 3.4 3.2 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.6 3.4 3.1 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.3 -2.9 -3.6 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.3 -3.3 -3.2 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
10.3 3.3 3.1 SRP277946 SRR12470074 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -4.2 -2.4 SRP277946 SRR12469574 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 -2.9 -3.5 SRP103736 SRR5440845 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.1 -3.2 -3.2 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 -3.5 -2.9 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
10.1 3.1 3.3 SRP114806 SRR5894654 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.0 -2.8 -3.6 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
Note: Samples whose contribution is more than 10 are outputted.



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