CoexViewer
Coexpression detail for AT3G14240 and QKY
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | AT3G14240 | Subtilase family protein | 820644 | At3g14240 | 0.92 | 4.03 | 2.87 | 4.08 | 497.60 | 2.34 | 1.52 | 3.22 | 2.31 | 1.15 | 2.08 | |
| ath | QKY | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein | 843811 | At1g74720 | 0.92 |
|
coex z = 2.8702 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 820644 (z-scored expression) |
843811 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 38.4 | -6.4 | -6.0 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 29.7 | -5.4 | -5.5 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 25.2 | -4.7 | -5.4 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 22.6 | -4.6 | -4.9 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 18.7 | -4.2 | -4.4 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 17.3 | -5.0 | -3.5 | SRP090458 | SRR4295856 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat] |
| 15.7 | 4.0 | 3.9 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 14.6 | 3.7 | 3.9 | SRP277946 | SRR12470193 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 13.8 | -4.0 | -3.4 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 13.5 | -4.4 | -3.1 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 13.2 | -3.3 | -4.0 | SRP253504 | SRR11359544 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 13.0 | -3.3 | -3.9 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 12.7 | -3.4 | -3.8 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 12.6 | -3.6 | -3.5 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 12.5 | 3.3 | 3.8 | SRP222258 | SRR15122126 | A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism |
| 12.3 | 3.3 | 3.8 | SRP277946 | SRR12470192 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 12.2 | 4.4 | 2.8 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 12.1 | 4.5 | 2.7 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 11.8 | 3.2 | 3.7 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 11.8 | -3.1 | -3.8 | SRP187381 | SRR8662350 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 11.8 | -2.9 | -4.0 | SRP101641 | SRR5330614 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 11.7 | -2.9 | -4.0 | SRP176451 | SRR8404535 | Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [RNA-seq] |
| 11.6 | 3.6 | 3.2 | SRP103736 | SRR5440786 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 11.6 | -4.1 | -2.8 | SRP091641 | SRR4426632 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 11.5 | 3.4 | 3.4 | SRP277946 | SRR12470188 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.5 | -3.3 | -3.5 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.4 | -3.5 | -3.2 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.2 | -3.7 | -3.1 | SRP090459 | SRR4296043 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI] |
| 11.2 | 3.3 | 3.4 | SRP277946 | SRR12470194 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.1 | -3.3 | -3.4 | SRP083970 | SRR4115297 | The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq] |
| 10.8 | 3.1 | 3.5 | SRP037984 | SRR1170682 | Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression |
| 10.7 | 3.3 | 3.3 | SRP365283 | SRR18430906 | Time-series RNAseq analysis following lateral root induction by gravistimulation |
| 10.7 | -2.5 | -4.3 | SRP315390 | SRR14275192 | The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome |
| 10.7 | 3.6 | 3.0 | SRP017386 | SRR627642 | Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings |
| 10.6 | 3.0 | 3.5 | SRP311610 | SRR14028737 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 10.5 | -3.3 | -3.2 | SRP251246 | SRR11213957 | Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis |
| 10.3 | 3.1 | 3.4 | SRP311610 | SRR14028738 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 10.3 | -3.0 | -3.5 | SRP324081 | SRR14813615 | ARATH-IN-OUT |
| 10.3 | -3.0 | -3.5 | SRP362867 | SRR18254735 | Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses |
| 10.3 | -2.9 | -3.5 | SRP039091 | SRR1179986 | Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource |
| 10.2 | -3.8 | -2.7 | ERP116123 | ERR3414875 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.2 | 2.9 | 3.5 | SRP311610 | SRR14028736 | Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background |
| 10.1 | -3.4 | -3.0 | SRP065994 | SRR2932456 | Identification of plant vacuolar transporters mediating phosphate storage |
| 10.1 | -3.1 | -3.2 | SRP097877 | SRR5205677 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 10.0 | -3.2 | -3.1 | SRP126872 | SRR6381405 | B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis |
The preparation time of this page was 0.8 [sec].
