CoexViewer

Coexpression detail for AT3G15070 and AT1G53190
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath AT3G15070 RING/U-box superfamily protein 820736 At3g15070 0.57 8.37 8.91 5.84
ath AT1G53190 RING/U-box superfamily protein 841753 At1g53190 0.57
Platform:

coex z = 8.9061



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 820736
(z-scored expression)		 841753
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
40.4 -5.6 -7.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
26.3 -5.0 -5.3 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.8 -5.2 -4.8 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
24.2 -4.5 -5.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
17.6 -4.2 -4.1 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.5 -4.2 -4.2 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
17.1 -4.2 -4.0 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
15.3 -3.8 -4.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.7 -4.7 -3.1 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
14.6 3.7 3.9 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
14.2 -4.2 -3.4 SRP018034 SRR2079771 Time-course transcriptome of wild-type Arabidopsis leaf
14.2 -4.7 -3.0 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
14.0 -3.5 -3.9 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
13.2 -3.9 -3.4 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.9 -3.8 -3.4 SRP119072 SRR6113963 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
12.7 3.3 3.9 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.7 3.4 3.7 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
12.5 -3.5 -3.6 SRP272650 SRR12272429 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
12.5 -3.9 -3.2 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.2 -3.1 -4.0 SRP119072 SRR6113965 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
12.1 -3.8 -3.2 ERP115370 ERR3333436 Arabidopsis tissue atlas
11.8 3.3 3.6 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.8 -3.4 -3.5 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
11.6 -3.5 -3.3 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
11.6 3.2 3.6 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.5 -3.7 -3.1 SRP126872 SRR6381405 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
11.4 -5.5 -2.1 SRP100064 SRR5263057 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.4 3.2 3.6 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 -2.6 -4.4 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
11.3 3.2 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.2 3.0 3.7 SRP151817 SRR7465450 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
11.2 3.1 3.6 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.2 -3.1 -3.6 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.0 3.1 3.6 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 2.9 3.8 SRP044776 SRR1523884 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
11.0 3.2 3.4 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 -2.7 -4.0 ERP116123 ERR3414641 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.8 3.1 3.5 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.7 -3.2 -3.4 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.7 3.0 3.6 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -3.3 -3.2 SRP119072 SRR6113964 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
10.5 3.1 3.4 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 -3.3 -3.2 SRP158306 SRR7694975 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.5 -2.6 -4.0 SRP251062 SRR11206305 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
10.4 -4.3 -2.4 SRP371011 SRR18808243 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
10.4 -3.2 -3.2 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
10.4 3.1 3.3 SRP151817 SRR7465414 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
10.3 3.1 3.3 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
10.3 2.7 3.8 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -3.5 -2.9 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.2 2.8 3.6 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -3.3 -3.1 ERP118109 ERR3624377 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
10.1 -3.1 -3.2 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
10.0 3.5 2.9 SRP114806 SRR5894654 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.0 -3.1 -3.2 SRP118634 SRR6059775 Comparison between ethylene signaling regulated transcriptome with glucose-TOR or glucose-HXK1 regulated transcriptome
Note: Samples whose contribution is more than 10 are outputted.



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