CoexViewer

Coexpression detail for AT3G15550 and AT5G16250
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT3G15550 trichohyalin 820794 At3g15550 0.29 9.80 8.34 8.59 27.70 3.01 4.52 0.81 1.81 0.71 4.07
ath AT5G16250 uncharacterized protein 831485 At5g16250 0.29
Platform:

coex z = 8.3408



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 820794
(z-scored expression)		 831485
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
38.9 -5.9 -6.6 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
25.2 -5.5 -4.6 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
19.7 -4.4 -4.5 SRP114806 SRR5894632 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
18.6 -4.2 -4.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
14.7 -3.7 -3.9 SRP044776 SRR1523942 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
14.6 -3.8 -3.8 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
14.3 -3.2 -4.4 SRP271641 SRR12211735 Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold
13.7 -5.2 -2.6 SRP154321 SRR7536044 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
13.7 -4.3 -3.2 SRP050945 SRR1696837 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
13.5 -3.5 -3.8 SRP044776 SRR1523938 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
12.7 -4.5 -2.8 SRP238608 SRR10760446 Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock
12.3 -3.8 -3.3 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
12.1 -3.5 -3.5 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.0 -4.6 -2.6 SRP306749 SRR13724791 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_11]
11.9 -3.4 -3.5 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.9 -3.4 -3.5 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.8 -2.9 -4.0 ERP115370 ERR3333442 Arabidopsis tissue atlas
11.8 -4.3 -2.7 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.7 -5.2 -2.2 SRP285119 SRR12698768 Time of day prioritizes the pool of translating mRNAs in response to heat stress
11.6 -3.4 -3.4 ERP118500 ERR3668650 Transcription profiling of Arabidopsis thaliana leaves as reaction to caterpillar (Trichoplusia ni) feeding and fungi (Laccaria bicolor) infection of the roots
11.3 -6.0 -1.9 SRP311610 SRR14028822 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.3 -3.6 -3.2 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
11.3 -8.2 -1.4 SRP100712 SRR5285649 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
11.3 -3.2 -3.5 SRP073485 SRR3401785 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
11.1 -2.9 -3.9 SRP279992 SRR12582695 Gene expression responses to ABA and to osmotic stress in the bon123 triple mutant
10.7 -3.3 -3.2 SRP093695 SRR5038570 Infection of Arabidopsis thaliana seedlings (Col-0, UBQ10::YFP-TCP14-4, tcp14-6 and coi1-16) with the Pseudomonas syringae strain DC3000 cor-
10.7 -3.1 -3.5 SRP091641 SRR4426632 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.7 -3.1 -3.5 SRP091641 SRR4426432 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.7 -3.1 -3.5 SRP091641 SRR4426614 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.7 -3.0 -3.6 SRP097877 SRR5205781 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.5 -2.9 -3.7 SRP362867 SRR18254732 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
10.5 -2.9 -3.7 SRP324081 SRR14813599 ARATH-IN-OUT
10.5 -4.1 -2.6 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.5 -3.0 -3.5 SRP056607 SRR1942868 Potential role of natural variation in the Arabidopsis CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden
10.3 3.2 3.3 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.3 2.9 3.6 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.3 -2.6 -3.9 SRP126156 SRR6347981 Equal parental contribution to the transcriptome is not equal control of embryogenesis
10.2 -4.2 -2.5 SRP272650 SRR12272429 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
10.2 -3.2 -3.2 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.1 -2.9 -3.5 SRP056607 SRR1942867 Potential role of natural variation in the Arabidopsis CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden
10.1 3.1 3.2 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
Note: Samples whose contribution is more than 10 are outputted.



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