CoexViewer

Coexpression detail for AT3G02340 and AT3G49800
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath AT3G02340 RING/U-box superfamily protein 821090 At3g02340 0.61 10.03 11.42 6.13
ath AT3G49800 BSD domain-containing protein 824142 At3g49800 0.61
Platform:

coex z = 11.417



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 821090
(z-scored expression)		 824142
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
34.3 -5.7 -6.0 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
29.8 -5.4 -5.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.3 4.3 5.6 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
20.1 -4.2 -4.8 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
19.6 -6.2 -3.2 SRP100712 SRR5285666 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
19.3 -4.5 -4.3 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
19.2 -6.2 -3.1 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
18.4 3.9 4.7 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
17.9 -4.3 -4.1 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
17.0 -4.1 -4.2 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
16.9 -3.8 -4.4 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
16.2 3.4 4.8 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
15.2 3.5 4.4 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.1 3.9 3.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
15.0 3.6 4.1 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
14.8 -5.3 -2.8 SRP101274 SRR5308808 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
14.7 3.9 3.8 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.3 -3.6 -3.9 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
13.9 3.6 3.9 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.2 -3.5 -3.7 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.9 -3.5 -3.7 SRP132865 SRR6726414 Molecular basis of flowering under natural long-day conditions in Arabidopsis
12.9 -3.5 -3.6 ERP115370 ERR3333436 Arabidopsis tissue atlas
12.7 -3.4 -3.7 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
12.7 3.6 3.6 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.6 3.5 3.6 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
12.5 3.3 3.7 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.4 -3.6 -3.4 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.2 -3.5 -3.5 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.9 -3.5 -3.4 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
11.8 -3.5 -3.4 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
11.8 3.4 3.5 SRP070918 SRR3193434 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
11.7 -3.6 -3.3 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
11.7 3.4 3.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.5 -4.0 -2.9 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
11.5 3.4 3.4 SRP126574 SRR6369494 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.1 -3.7 -3.0 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
11.1 -4.6 -2.4 SRP105272 SRR5482538 Cell type transcriptomic profile of the Arabidopsis root stem cell niche
11.1 -3.4 -3.3 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
11.0 -3.2 -3.4 SRP297920 SRR13253061 Transcript analysis under phosphate and iron deprivation in 7 day old Arabidopsis thaliana seedlings
11.0 3.4 3.2 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
10.8 3.2 3.3 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.7 3.1 3.5 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
10.7 -3.3 -3.2 ERP115370 ERR3333437 Arabidopsis tissue atlas
10.7 -3.2 -3.3 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.7 -3.2 -3.4 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
10.6 -3.1 -3.4 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.6 3.3 3.2 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -3.1 -3.3 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.2 -2.6 -4.0 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.1 -3.3 -3.1 SRP150217 SRR7289585 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 -3.1 -3.3 SRP257480 SRR11573268 Relevance of Unfolded Protein Response to Spaceflight-Induced Transcriptional Reprogramming in Arabidopsis
Note: Samples whose contribution is more than 10 are outputted.



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