CoexViewer
Coexpression detail for TMAC2 and AFP2
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | TMAC2 | AFP2 (ABI five-binding protein 2) family protein | 821182 | At3g02140 | 0.46 | 5.60 | 4.75 | 4.94 | 243.10 | 0.59 | 1.96 | 2.14 | 1.46 | 2.13 | 3.68 | |
| ath | AFP2 | ABI five binding protein 2 | 837934 | At1g13740 | 0.46 |
|
coex z = 4.7492 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 821182 (z-scored expression) |
837934 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 26.0 | -4.8 | -5.4 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 25.3 | -5.2 | -4.9 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 24.0 | -4.5 | -5.3 | SRP285380 | SRR12712251 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 21.3 | 4.8 | 4.4 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 13.1 | 2.9 | 4.5 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 11.1 | 3.8 | 2.9 | SRP114806 | SRR5894659 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 10.9 | -3.2 | -3.4 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 10.7 | 2.9 | 3.6 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 10.6 | -3.1 | -3.4 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 10.5 | -2.5 | -4.3 | SRP119072 | SRR6114010 | Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana |
| 10.3 | -4.2 | -2.5 | SRP189792 | SRR8800798 | Role of AtMLKLs in response to powdery mildew fungus |
| 10.2 | -2.9 | -3.5 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
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