CoexViewer

Coexpression detail for AT3G19540 and AT3G61670
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT3G19540 glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 821490 At3g19540 0.76 3.79 3.52 3.05 375.70 1.22 1.82 1.33 0.83 -1.07 2.90
ath AT3G61670 extra-large G-like protein, putative (DUF3133) 825340 At3g61670 0.76
Platform:

coex z = 3.5187



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 821490
(z-scored expression)		 825340
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
47.3 -6.4 -7.4 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
36.7 -6.6 -5.5 ERP115370 ERR3333443 Arabidopsis tissue atlas
30.5 -5.6 -5.4 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
22.0 -4.5 -4.9 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
20.9 -3.4 -6.1 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
18.9 -4.2 -4.5 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.4 -3.7 -4.4 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
15.0 -3.8 -3.9 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
14.5 -3.4 -4.2 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
14.2 4.0 3.5 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.7 3.6 3.8 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.4 -3.9 -3.4 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
13.3 -3.6 -3.7 ERP116123 ERR3414642 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
13.1 -5.0 -2.6 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
12.8 -3.3 -3.8 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.7 -2.8 -4.5 SRP176451 SRR8404535 Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [RNA-seq]
12.6 3.5 3.6 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.4 3.5 3.5 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.0 -4.2 -2.9 SRP164718 SRR7985416 Maternal to zygotic transition:A two-step process with two phases of ZGA occurs in zygote right after fertilization in Arabidopsis
11.9 3.5 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.9 3.4 3.5 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.9 -3.3 -3.6 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
11.9 -3.5 -3.4 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.8 -4.0 -2.9 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.7 3.7 3.2 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.7 3.4 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.6 2.8 4.1 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.6 -3.7 -3.2 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.6 3.3 3.5 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.5 3.5 3.3 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.3 -3.2 -3.5 ERP116123 ERR3414641 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.3 3.4 3.4 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 -3.0 -3.7 SRP214585 SRR9681601 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
11.0 -4.1 -2.7 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.0 -3.2 -3.4 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.9 3.0 3.7 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 -2.9 -3.7 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.8 3.0 3.6 SRP154323 SRR7536247 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
10.8 -2.7 -4.0 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
10.8 -3.8 -2.8 SRP073487 SRR3401835 Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
10.4 -3.5 -3.0 SRP097877 SRR5205781 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.4 -3.4 -3.1 ERP109739 ERR2683774 Transcriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway
10.3 -3.5 -2.9 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.3 -2.7 -3.9 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
10.2 3.1 3.3 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.2 -3.0 -3.4 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 -3.5 -2.9 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 3.0 3.4 SRP103736 SRR5440786 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.1 -3.1 -3.3 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
Note: Samples whose contribution is more than 10 are outputted.



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