CoexViewer

Coexpression detail for AT3G19540 and AT3G63290
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT3G19540 glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 821490 At3g19540 0.76 3.68 3.32 3.05 1534.70 1.22 2.88 -0.37 0.12 -0.13 1.57
ath AT3G63290 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 825504 At3g63290 0.76
Platform:

coex z = 3.3192



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 821490
(z-scored expression)		 825504
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
34.6 -6.4 -5.4 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
29.8 -6.6 -4.5 ERP115370 ERR3333443 Arabidopsis tissue atlas
23.0 -4.2 -5.5 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
20.3 -5.0 -4.1 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
20.1 -5.6 -3.6 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
19.8 -3.7 -5.3 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
15.4 -2.7 -5.8 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
15.1 -3.9 -3.9 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.4 -3.4 -4.2 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
14.0 -3.8 -3.7 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
13.6 -3.1 -4.3 SRP339340 SRR16119309 Single seeds exhibit transcriptional heterogeneity during secondary dormancy induction
13.3 -2.1 -6.3 SRP285119 SRR12698763 Time of day prioritizes the pool of translating mRNAs in response to heat stress
13.0 -2.9 -4.5 SRP337622 SRR15931267 Hydropriming: the plant endophyte Pseudomonas argenenensis SA190 induces drought tolerance in plants via reprograming aquaporin expression and water use efficiency
12.6 -3.5 -3.6 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.3 3.3 3.7 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
12.0 -2.9 -4.1 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
12.0 -4.1 -2.9 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.0 -3.7 -3.3 SRP101274 SRR5308642 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
11.8 4.0 2.9 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.7 -4.5 -2.6 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
11.6 -3.2 -3.6 ERP116123 ERR3414641 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.5 -3.5 -3.3 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.2 -3.7 -3.1 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.2 -5.7 -2.0 SRP229078 SRR10416643 Global transcriptomic analysis of Arabidopsis thaliana ecotype Columbia-0 subjected to magnesium deficiency
10.9 -2.6 -4.1 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.8 -3.0 -3.6 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.7 3.4 3.1 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.7 -2.8 -3.9 SRP102178 SRR5360867 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.6 -3.3 -3.3 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
10.6 -3.2 -3.3 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.2 3.6 2.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.2 -1.9 -5.3 SRP214585 SRR9681416 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
Note: Samples whose contribution is more than 10 are outputted.



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