CoexViewer

Coexpression detail for AT3G19540 and AT5G66770
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT3G19540 glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) 821490 At3g19540 0.76 4.50 4.45 3.34 19.80 1.36 2.45 3.01 3.64 2.18 4.03
ath AT5G66770 GRAS family transcription factor 836810 At5g66770 0.76
Platform:

coex z = 4.4499



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 821490
(z-scored expression)		 836810
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
39.3 -6.6 -5.9 ERP115370 ERR3333443 Arabidopsis tissue atlas
38.7 -6.4 -6.0 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
27.0 -5.6 -4.8 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
21.1 -4.5 -4.7 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
16.8 -4.2 -4.0 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.6 -3.2 -5.2 ERP116123 ERR3414641 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
15.3 -3.0 -5.2 ERP116123 ERR3414638 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
15.2 4.0 3.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
14.5 3.6 4.0 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
14.4 -3.4 -4.2 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
13.5 -3.9 -3.5 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.9 -3.4 -3.8 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
12.9 -3.3 -3.9 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
12.8 -3.8 -3.4 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
12.7 -4.1 -3.1 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
12.4 -2.3 -5.4 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
12.4 -3.7 -3.4 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.0 3.3 3.6 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.0 -4.0 -3.0 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.8 -3.7 -3.2 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.6 -3.5 -3.3 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.3 -3.5 -3.2 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.3 3.7 3.1 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.2 -3.5 -3.2 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.0 3.4 3.2 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.8 -3.0 -3.6 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.8 -3.6 -3.0 ERP116123 ERR3414642 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.7 -3.8 -2.8 SRP073487 SRR3401835 Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
10.6 2.8 3.8 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.6 3.0 3.6 SRP103736 SRR5440786 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.6 2.8 3.7 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -3.5 -3.0 SRP101641 SRR5330623 Chloroplast signalling gates thermotolerance in Arabidopsis
10.5 3.5 3.0 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.5 -3.7 -2.9 SRP101274 SRR5308642 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
10.5 3.4 3.1 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 3.0 3.5 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 -5.0 -2.1 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
10.3 3.6 2.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.2 3.4 3.0 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 -2.7 -3.8 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
10.1 3.4 3.0 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 -3.2 -3.1 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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