CoexViewer
Coexpression detail for MSR1 and FLA16
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | MSR1 | O-fucosyltransferase family protein | 821672 | At3g21190 | 0.65 | 7.81 | 6.16 | 7.34 | 2.00 | 5.32 | 4.27 | 5.68 | 4.77 | 3.34 | 4.58 | |
| ath | FLA16 | FASCICLIN-like arabinogalactan protein 16 precursor | 818159 | At2g35860 | 0.65 |
|
coex z = 6.1625 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 821672 (z-scored expression) |
818159 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 31.0 | -5.6 | -5.6 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 23.8 | -5.0 | -4.8 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 23.5 | -3.8 | -6.2 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 18.7 | -3.7 | -5.0 | SRP091641 | SRR4426582 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 17.9 | -5.2 | -3.4 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 17.1 | -4.0 | -4.3 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 16.6 | -3.7 | -4.5 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 15.9 | -4.1 | -3.8 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 14.9 | 2.7 | 5.6 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 14.3 | 4.2 | 3.4 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 14.3 | -2.9 | -5.0 | SRP091641 | SRR4426511 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 14.0 | -3.6 | -3.9 | ERP106738 | ERR2286776 | Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana |
| 13.8 | 2.7 | 5.1 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 13.0 | -3.1 | -4.2 | SRP187156 | SRR8648403 | Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection |
| 12.9 | -3.8 | -3.4 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 12.8 | -3.0 | -4.3 | SRP220476 | SRR10072749 | Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants |
| 12.3 | -2.9 | -4.3 | SRP220476 | SRR10072753 | Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants |
| 12.1 | -3.3 | -3.6 | SRP101641 | SRR5330614 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 12.1 | -3.6 | -3.3 | SRP251246 | SRR11213957 | Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis |
| 11.8 | 2.4 | 5.0 | ERP123539 | ERR4471741 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 11.8 | -3.2 | -3.6 | SRP101641 | SRR5330623 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 11.3 | -2.3 | -5.0 | SRP091641 | SRR4426432 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 11.1 | -3.2 | -3.4 | SRP102178 | SRR5360867 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 11.1 | -2.3 | -4.9 | SRP090458 | SRR4295915 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat] |
| 11.0 | -3.7 | -3.0 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 11.0 | -2.2 | -5.0 | SRP091641 | SRR4449334 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.8 | -3.6 | -3.0 | SRP091641 | SRR4426789 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 10.8 | -3.8 | -2.8 | ERP013651 | ERR1194838 | Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid |
| 10.5 | -3.1 | -3.4 | SRP061868 | SRR2136678 | Expression profiling during early flower development [RNA-seq] |
| 10.1 | -3.2 | -3.1 | SRP169564 | SRR8206395 | Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression |
The preparation time of this page was 0.8 [sec].
