CoexViewer
Coexpression detail for MSR1 and FLA15
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | MSR1 | O-fucosyltransferase family protein | 821672 | At3g21190 | 0.65 | 8.25 | 7.74 | 6.51 | 2.50 | 2.02 | 5.52 | 5.09 | 4.86 | 2.99 | 5.99 | |
| ath | FLA15 | FASCICLIN-like arabinogalactan protein 15 precursor | 824402 | At3g52370 | 0.65 |
|
coex z = 7.7422 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 821672 (z-scored expression) |
824402 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 35.7 | -5.6 | -6.4 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 25.1 | -5.2 | -4.8 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 22.1 | -5.0 | -4.5 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 17.4 | -5.4 | -3.2 | SRP266133 | SRR11934413 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 17.1 | 4.2 | 4.1 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 16.7 | 2.7 | 6.3 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 16.3 | -3.2 | -5.0 | ERP116123 | ERR3414706 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 16.1 | -3.8 | -4.3 | SRP345854 | SRR16934641 | Phytochrome B regulates reactive oxygen signaling during stress in plants. |
| 15.9 | -4.0 | -4.0 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 15.9 | 2.7 | 5.9 | ERP123539 | ERR4471742 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 15.7 | -3.6 | -4.4 | SRP091641 | SRR4426789 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 15.1 | -3.7 | -4.0 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 14.0 | -4.1 | -3.4 | SRP361288 | SRR18124836 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 13.8 | -3.1 | -4.5 | SRP097690 | SRR5197907 | Tissue-Specific Transcriptomics Reveals Role of the Unfolded Protein Response in Maintaining Fertility upon Heat Stress in Arabidopsis |
| 13.7 | -3.7 | -3.8 | SRP274404 | SRR12356829 | Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [w5C6] |
| 13.6 | -3.4 | -4.0 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 13.1 | -3.7 | -3.5 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 12.9 | -3.7 | -3.4 | SRP091641 | SRR4426582 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.4 | -3.7 | -3.4 | ERP106238 | ERR2245583 | PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis |
| 12.1 | 3.6 | 3.3 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 11.2 | -3.8 | -3.0 | ERP013651 | ERR1194838 | Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid |
| 11.2 | 3.4 | 3.3 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 11.1 | -3.1 | -3.5 | SRP323348 | SRR14766024 | Differentially expressed transcriptomes of NADases mutant in Arabidopsis |
| 11.0 | -2.9 | -3.8 | SRP220476 | SRR10072755 | Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants |
| 11.0 | -3.6 | -3.0 | SRP251246 | SRR11213957 | Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis |
| 10.8 | -3.1 | -3.4 | SRP187156 | SRR8648403 | Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection |
| 10.7 | -3.5 | -3.1 | SRP149815 | SRR7266189 | Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity |
| 10.7 | -3.5 | -3.1 | SRP149815 | SRR7266190 | Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity |
| 10.5 | -3.3 | -3.2 | SRP101641 | SRR5330614 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 10.5 | -2.1 | -5.0 | ERP116123 | ERR3414876 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 10.2 | 2.9 | 3.6 | SRP097877 | SRR5205694 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 10.1 | -3.0 | -3.4 | SRP150217 | SRR7289599 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.1 | -3.1 | -3.2 | SRP266133 | SRR11934421 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 10.1 | -3.1 | -3.2 | SRP266133 | SRR11934499 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 10.1 | -3.1 | -3.2 | SRP266133 | SRR11934605 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
| 10.1 | -3.1 | -3.2 | SRP266133 | SRR11934496 | Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions |
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