CoexViewer

Coexpression detail for MSR1 and AT4G27720
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath MSR1 O-fucosyltransferase family protein 821672 At3g21190 0.65 6.01 5.33 5.06 310.40 1.89 1.19 3.32 1.54 0.37 4.55
ath AT4G27720 Major facilitator superfamily protein 828886 At4g27720 0.65
Platform:

coex z = 5.3311



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 821672
(z-scored expression)		 828886
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
31.0 -5.6 -5.6 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
27.7 -5.0 -5.6 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
22.5 -5.2 -4.3 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
21.0 4.2 5.0 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
16.8 -3.8 -4.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
15.9 -3.4 -4.7 ERP115370 ERR3333443 Arabidopsis tissue atlas
15.5 -3.7 -4.2 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
15.4 -4.0 -3.9 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
15.1 -3.5 -4.3 SRP126574 SRR6369550 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
15.1 -3.0 -5.0 SRP285902 SRR12747511 ­Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis
15.0 -4.1 -3.6 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
14.9 -4.1 -3.6 SRP100064 SRR5263032 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
13.6 -3.3 -4.2 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
13.6 -3.6 -3.7 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
13.3 3.6 3.7 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.1 3.5 3.7 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 -3.1 -4.0 SRP100064 SRR5263028 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
12.3 -3.8 -3.2 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.9 3.3 3.6 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 2.9 4.0 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 -3.7 -3.1 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.5 3.4 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.5 -3.2 -3.6 SRP103736 SRR5440873 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.5 -3.3 -3.5 SRP083970 SRR4115362 The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq]
11.5 -3.7 -3.1 SRP103736 SRR5440882 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.4 -2.6 -4.4 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.3 -3.9 -2.9 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
10.9 3.2 3.4 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.8 3.2 3.3 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 3.1 3.5 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.8 -3.2 -3.4 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.8 3.1 3.5 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.8 -3.2 -3.3 ERP116123 ERR3414706 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.7 3.1 3.5 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.7 -3.1 -3.4 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
10.6 3.2 3.3 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -3.2 -3.3 SRP101641 SRR5330623 Chloroplast signalling gates thermotolerance in Arabidopsis
10.5 3.0 3.5 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -3.6 -2.9 SRP100938 SRR5304658 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.2 -3.3 -3.1 SRP101641 SRR5330614 Chloroplast signalling gates thermotolerance in Arabidopsis
10.1 -3.8 -2.7 ERP013651 ERR1194838 Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid
10.1 -3.1 -3.2 SRP220476 SRR10072757 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
Note: Samples whose contribution is more than 10 are outputted.



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