CoexViewer

Coexpression detail for MSR1 and AT5G58000
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-e.c1-0
ath MSR1 O-fucosyltransferase family protein 821672 At3g21190 0.65 4.58 4.62 4.81
ath AT5G58000 Reticulon family protein 835911 At5g58000 0.65
Platform:

coex z = 4.6161



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 821672
(z-scored expression)		 835911
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
31.7 -5.6 -5.7 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
25.1 -5.0 -5.1 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
22.2 -5.2 -4.3 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
16.3 -4.0 -4.1 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
14.5 4.2 3.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.2 -3.4 -4.1 SRP114806 SRR5894454 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
14.0 -3.7 -3.7 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
13.6 -3.7 -3.6 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.4 -3.6 -3.7 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
13.1 -3.1 -4.2 SRP266133 SRR11934421 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
13.1 -3.1 -4.2 SRP266133 SRR11934605 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.6 -3.8 -3.3 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
12.6 -3.7 -3.4 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
12.3 3.2 3.8 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 3.1 4.0 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.9 -3.6 -3.3 SRP091641 SRR4426789 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.9 -3.8 -3.1 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.8 -3.5 -3.3 SRP114806 SRR5894632 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.8 3.6 3.2 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.5 -3.0 -3.9 SRP091641 SRR4426531 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.5 -2.7 -4.3 SRP154321 SRR7535979 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
11.2 -3.2 -3.5 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.1 -2.8 -4.0 SRP070918 SRR3193421 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
11.1 -3.1 -3.5 SRP159259 SRR7774155 Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress.
11.1 -3.3 -3.3 SRP157719 SRR7688912 Metabolic labeling of RNAs uncovers hidden features and dynamics of the Arabidopsis thaliana transcriptome [ERIC]
11.0 2.9 3.8 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
10.9 2.9 3.7 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -3.1 -3.4 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
10.6 -3.2 -3.3 SRP101641 SRR5330623 Chloroplast signalling gates thermotolerance in Arabidopsis
10.4 -3.2 -3.3 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.3 -2.5 -4.2 SRP266133 SRR11934452 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.1 3.2 3.2 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 3.5 2.9 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 3.4 3.0 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
Note: Samples whose contribution is more than 10 are outputted.



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