CoexViewer

Coexpression detail for LHCB2.3 and AT5G48490
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath LHCB2.3 photosystem II light harvesting complex protein 2.3 822391 At3g27690 0.93 9.58 7.94 8.61 16.50 2.66 3.52 4.27 1.92 2.90 2.83
ath AT5G48490 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 834905 At5g48490 0.93
Platform:

coex z = 7.9417



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 822391
(z-scored expression)		 834905
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
35.0 -5.6 -6.3 SRP114806 SRR5894639 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
22.6 -6.2 -3.7 SRP277946 SRR12469769 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
22.0 -6.5 -3.4 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
20.6 -5.4 -3.8 SRP277946 SRR12469640 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
20.5 2.6 7.9 SRP100064 SRR5262950 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
18.2 -4.7 -3.9 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
16.6 3.3 5.0 SRP126574 SRR6369486 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
16.5 -4.3 -3.8 SRP114806 SRR5894631 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
15.9 -5.7 -2.8 SRP277946 SRR12469770 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.5 -4.0 -3.9 SRP114806 SRR5894650 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
15.3 -4.9 -3.1 SRP277946 SRR12469639 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.9 -5.2 -2.8 SRP277946 SRR12469641 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.8 2.6 5.7 SRP100064 SRR5262949 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
14.8 2.6 5.7 SRP126574 SRR6369500 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
14.5 -5.6 -2.6 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.8 -3.9 -3.6 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
13.5 -5.4 -2.5 SRP277946 SRR12469766 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.9 -5.6 -2.3 SRP277946 SRR12469642 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 -5.8 -2.1 SRP277946 SRR12469768 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 2.9 4.2 SRP255966 SRR11523455 Whole genome RNA-sequencing from roots of Arabidopsis thaliana wild-type and stop1 exposed to low pH, low phosphate (Pi), Aluminum and Iron excess conditions.
12.0 2.8 4.3 SRP051665 SRR1738108 Translatome analyses of opposing tissue-specific brassinosteroid signals orchestrating root meristem differentiation
11.9 -3.7 -3.2 SRP114806 SRR5894660 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.8 2.7 4.4 SRP100064 SRR5262952 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.3 -3.6 -3.2 SRP114806 SRR5894649 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.1 -3.9 -2.9 SRP136812 SRR6919645 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
10.9 -4.1 -2.7 SRP073485 SRR3401785 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
10.9 2.4 4.5 SRP101274 SRR5309229 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
10.9 2.2 5.0 SRP126574 SRR6369531 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.5 -3.6 -2.9 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.4 -3.5 -3.0 ERP116123 ERR3414780 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.2 -2.8 -3.6 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
Note: Samples whose contribution is more than 10 are outputted.



The preparation time of this page was 1.0 [sec].