CoexViewer

Coexpression detail for AAR3 and POP4
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AAR3 defective in cullin neddylation protein (DUF298) 822537 At3g28970 0.51 4.56 4.10 3.78 -0.18 1.37 1.79 1.84 1.74 0.77
ath POP4 ribonuclease P family protein 818920 At2g43190 0.51
Platform:

coex z = 4.1007



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 822537
(z-scored expression)		 818920
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
27.5 -6.1 -4.5 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
25.4 -5.3 -4.8 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.0 -4.4 -5.4 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
23.0 -4.9 -4.7 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
22.5 -6.2 -3.7 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
20.6 -4.4 -4.7 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
20.0 -5.2 -3.9 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
19.5 4.7 4.2 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
18.6 -4.9 -3.8 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
16.6 -4.2 -3.9 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
16.1 -3.4 -4.7 SRP277946 SRR12470006 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.8 -3.5 -4.5 SRP272650 SRR12272429 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
14.6 -4.1 -3.6 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.0 -4.0 -3.5 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
14.0 -3.6 -3.9 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
13.6 -3.7 -3.7 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.4 -3.5 -3.9 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.2 4.2 3.1 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.7 -3.2 -4.0 SRP187381 SRR8661970 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
12.5 -3.4 -3.6 SRP214585 SRR9681201 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
12.2 3.6 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
12.1 -3.2 -3.8 SRP073485 SRR3401801 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
12.0 -4.4 -2.7 SRP361288 SRR18124820 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.9 -2.7 -4.4 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
11.9 3.6 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.9 -3.3 -3.6 SRP103736 SRR5440873 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.7 3.3 3.5 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.6 -3.5 -3.4 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.1 3.4 3.2 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
11.1 4.2 2.6 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 3.5 3.2 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.9 -2.9 -3.8 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
10.9 -3.1 -3.5 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.9 4.3 2.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 -3.5 -3.1 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
10.8 3.0 3.6 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.8 -3.5 -3.1 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
10.7 -3.4 -3.2 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.7 -3.1 -3.5 SRP102178 SRR5360867 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.6 -2.8 -3.7 SRP137763 SRR6950029 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
10.5 3.3 3.1 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 3.5 3.0 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.3 -3.1 -3.3 SRP371011 SRR18808243 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
10.2 3.0 3.4 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
10.2 -3.1 -3.2 SRP083970 SRR4115329 The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq]
10.2 -3.2 -3.2 SRP286047 SRR12762107 The impact of the genes BBX32 and HY5 on the high light - responsive transcriptome of Arabidopsis thaliana
10.1 -4.1 -2.5 SRP234996 SRR10603562 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
10.1 3.6 2.8 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 3.6 2.8 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
Note: Samples whose contribution is more than 10 are outputted.



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