CoexViewer

Coexpression detail for AAR3 and AT5G59460
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AAR3 defective in cullin neddylation protein (DUF298) 822537 At3g28970 0.51 4.14 3.25 3.91 1292.40 -0.79 1.31 1.64 0.75 -0.34 1.12
ath AT5G59460 scarecrow-like transcription factor 11 (SCL11) 836065 At5g59460 0.51
Platform:

coex z = 3.2526



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 822537
(z-scored expression)		 836065
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
36.9 -6.2 -6.0 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
29.2 -6.1 -4.8 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
24.4 -4.9 -5.0 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
24.0 -5.3 -4.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
20.7 -4.9 -4.2 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
20.4 -4.4 -4.6 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
20.0 -4.4 -4.6 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
19.6 -5.2 -3.8 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
18.2 4.4 4.1 SRP114806 SRR5894385 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
17.1 -4.1 -4.2 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
16.1 4.7 3.4 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
16.1 -4.2 -3.8 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
15.7 4.2 3.7 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.6 -4.0 -3.9 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
15.6 4.2 3.7 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
15.2 -3.4 -4.4 ERP116123 ERR3414641 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
15.1 -4.0 -3.8 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
14.6 -4.8 -3.0 SRP100712 SRR5285650 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
14.4 -3.3 -4.4 ERP116123 ERR3414637 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
14.3 4.3 3.4 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
13.8 -3.6 -3.8 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
13.7 4.3 3.1 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.5 -3.4 -4.0 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
13.3 -4.4 -3.1 SRP101274 SRR5308792 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
13.2 -3.7 -3.6 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
12.9 -4.3 -3.0 ERP116123 ERR3414638 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
12.9 3.3 3.9 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.1 3.6 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.9 3.4 3.5 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
11.9 -3.5 -3.4 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
11.7 3.6 3.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.7 3.6 3.3 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 -2.9 -4.0 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
11.6 3.0 3.8 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
11.5 -3.5 -3.3 SRP163443 SRR8060876 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
11.4 -3.7 -3.1 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.4 3.1 3.7 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.3 3.6 3.1 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 -2.9 -3.8 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.0 -4.1 -2.7 SRP234996 SRR10603562 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
11.0 3.0 3.6 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.9 -3.5 -3.1 SRP272650 SRR12272429 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
10.7 -2.8 -3.9 SRP126574 SRR6369550 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.6 3.5 3.1 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.6 -3.8 -2.8 SRP119072 SRR6113963 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
10.6 -2.6 -4.0 SRP103817 SRR5444419 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
10.6 -2.6 -4.0 SRP103817 SRR5444439 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
10.5 3.5 3.0 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 -3.5 -3.0 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.3 -3.5 -3.0 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.3 -2.9 -3.5 SRP090913 SRR8185440 WallOmics
10.1 -3.4 -3.0 SRP119072 SRR6113964 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
10.0 -3.4 -3.0 SRP145580 SRR7160920 Gene expression responses to ABA and to osmotic stress in the pyl112458 379101112 mutant
Note: Samples whose contribution is more than 10 are outputted.



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