CoexViewer

Coexpression detail for AT3G53170 and PGN
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT3G53170 LOW protein: PPR containing protein 824483 At3g53170 0.26 6.16 4.72 5.94 733.20 2.74 1.83 0.44 1.84 -1.20 1.57
ath PGN Tetratricopeptide repeat (TPR)-like superfamily protein 842111 At1g56570 0.26
Platform:

coex z = 4.7159



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 824483
(z-scored expression)		 842111
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
33.0 -5.2 -6.3 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
17.6 -4.8 -3.7 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
17.4 -3.9 -4.4 SRP272650 SRR12272425 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
15.1 -4.3 -3.6 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
14.6 -2.4 -6.1 SRP091641 SRR4426350 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
14.6 -4.1 -3.6 SRP103736 SRR5440882 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
14.3 -2.8 -5.0 SRP154321 SRR7536042 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
14.1 -2.4 -6.0 SRP277946 SRR12469894 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.1 -5.2 -2.7 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
14.0 -4.7 -3.0 SRP285090 SRR12697085 Differential alteration of plant functions by homologous fungal candidate effectors
13.8 -3.9 -3.5 SRP137763 SRR6950045 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
13.7 -3.8 -3.6 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
12.9 -2.6 -5.0 SRP154321 SRR7536045 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
12.8 -3.9 -3.2 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
12.7 -3.4 -3.8 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
12.5 -3.9 -3.2 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.3 3.4 3.6 SRP021196 SRR1610506 RNA-Seq of single cells from the Arabidopsis root
12.1 -2.7 -4.4 SRP073485 SRR3401812 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
12.0 -2.9 -4.1 SRP238608 SRR10760446 Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock
11.8 -3.8 -3.1 ERP021422 ERR1827503 Arabidopsis stem cell transcriptome
11.7 -3.4 -3.4 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
11.7 -1.9 -6.0 SRP277946 SRR12470092 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 -2.4 -4.7 ERP115370 ERR3333439 Arabidopsis tissue atlas
11.3 3.4 3.3 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.2 -5.1 -2.2 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
11.0 -3.1 -3.5 SRP051665 SRR1738113 Translatome analyses of opposing tissue-specific brassinosteroid signals orchestrating root meristem differentiation
10.4 -2.3 -4.5 SRP114806 SRR5894511 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.4 -2.1 -5.0 SRP154321 SRR7536077 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
10.4 -4.0 -2.6 SRP234036 SRR10560319 Gene expression profile of Arabidopsis thaliana wild type and siz1-2 mutant during in vitro shoot regeneration on callus inducing media (CIM) and shoot inducing media (SIM)
10.4 -2.4 -4.3 SRP069198 SRR3139508 The SnRK1-eIFiso4G1 signaling relay regulates the translation of specific mRNAs in Arabidopsis under submergence
10.2 -2.9 -3.6 SRP091641 SRR4426632 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.1 -3.2 -3.2 SRP365413 SRR18441257 Profiling of bulk and ribosome associated mRNA of Arabidopsis roots upon lateral root induction upon TOR activity inhibition with AZD8055 [dataset2]
Note: Samples whose contribution is more than 10 are outputted.



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