CoexViewer

Coexpression detail for MEE40 and SVR7
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath MEE40 Pentatricopeptide repeat (PPR) superfamily protein 824537 At3g53700 0.63 11.38 9.67 10.01 3.00 4.45 3.66 4.69 3.97 2.56 6.07
ath SVR7 pentatricopeptide (PPR) repeat-containing protein 827333 At4g16390 0.63
Platform:

coex z = 9.671



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 824537
(z-scored expression)		 827333
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
35.1 -6.3 -5.6 ERP115370 ERR3333443 Arabidopsis tissue atlas
30.3 -5.6 -5.4 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
24.9 -5.0 -5.0 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.8 -4.9 -5.1 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
19.9 -5.0 -4.0 SRP165731 SRR8054399 The embryonic transcriptome of Arabidopsis thaliana
19.2 -3.2 -6.1 SRP267137 SRR12005743 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
18.8 4.6 4.1 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
16.2 4.2 3.8 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.6 -4.6 -3.2 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
14.4 3.9 3.7 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.4 -3.9 -3.7 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
13.9 3.9 3.6 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
13.7 -4.7 -2.9 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
13.6 -5.7 -2.4 SRP155742 SRR8699976 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
13.5 3.8 3.6 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.2 -3.7 -3.6 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
12.8 -3.3 -3.9 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
12.7 -3.8 -3.4 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.6 -3.7 -3.4 SRP091641 SRR4426959 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.4 4.1 3.1 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 3.6 3.4 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 -3.7 -3.3 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.8 3.5 3.4 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 3.3 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.2 -3.7 -3.1 SRP269252 SRR12110257 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
11.1 -3.6 -3.1 SRP091641 SRR4426949 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.1 -2.8 -3.9 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
11.0 -3.6 -3.1 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
10.5 3.5 3.0 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.5 3.2 3.3 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.5 -3.8 -2.7 SRP104760 SRR5467210 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
10.3 -3.4 -3.1 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.3 -3.4 -3.1 SRP091641 SRR4426346 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.2 3.4 3.0 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 -3.2 -3.2 SRP150217 SRR7289615 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 -3.3 -3.0 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
10.0 3.2 3.2 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.0 -3.3 -3.0 SRP150217 SRR7289598 Widespread inter-individual gene expression variability in Arabidopsis thaliana
Note: Samples whose contribution is more than 10 are outputted.



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