CoexViewer

Coexpression detail for MEE40 and AT5G46580
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath MEE40 Pentatricopeptide repeat (PPR) superfamily protein 824537 At3g53700 0.63 8.93 7.59 7.84 23.40 3.98 2.59 4.93 2.16 2.36 6.11
ath AT5G46580 pentatricopeptide (PPR) repeat-containing protein 834701 At5g46580 0.63
Platform:

coex z = 7.5925



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 824537
(z-scored expression)		 834701
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
35.1 -5.6 -6.2 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
26.7 -6.3 -4.2 ERP115370 ERR3333443 Arabidopsis tissue atlas
24.5 -5.0 -4.9 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
22.4 -3.6 -6.2 SRP100064 SRR5263129 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
21.7 4.6 4.7 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
21.2 -4.9 -4.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
20.3 -4.6 -4.4 SRP285380 SRR12712251 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
20.3 -4.6 -4.4 SRP285380 SRR12712240 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
17.6 4.2 4.2 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
16.8 -4.7 -3.6 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
16.3 3.9 4.1 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
16.0 -3.9 -4.1 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
16.0 -5.0 -3.2 SRP165731 SRR8054399 The embryonic transcriptome of Arabidopsis thaliana
14.7 4.1 3.6 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.2 3.8 3.7 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.6 -3.7 -3.7 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
13.5 -3.8 -3.6 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
13.3 -3.7 -3.6 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
12.6 3.9 3.2 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
12.4 3.6 3.4 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 -3.8 -3.2 SRP104760 SRR5467210 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
12.0 3.5 3.4 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.8 -3.2 -3.7 SRP267137 SRR12005735 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
11.7 -3.6 -3.3 SRP173260 SRR8310903 Functional relationship of GUN1 and FUG1 in plastid proteostasis
11.6 3.5 3.3 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 3.2 3.6 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 -1.9 -5.9 SRP100938 SRR5304686 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
11.3 -3.1 -3.6 SRP185814 SRR8570493 RNA-seq analysis reveals organ-specific cold response in Arabidopsis thaliana
10.8 3.2 3.3 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.8 -4.2 -2.5 SRP238084 SRR10733479 Cellular trajectory analysis links tissue maturation to cellular specialization in the plant meristem [protophloem sieve element cells]
10.5 -2.7 -3.9 ERP116123 ERR3414875 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.5 -3.2 -3.3 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
10.5 -3.3 -3.2 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.5 -3.3 -3.1 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
10.4 -3.3 -3.2 SRP150217 SRR7289598 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.2 3.3 3.1 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.2 -2.7 -3.8 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.2 -3.2 -3.1 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.1 -3.7 -2.7 SRP091641 SRR4426959 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.1 3.5 2.9 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
Note: Samples whose contribution is more than 10 are outputted.



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