CoexViewer

Coexpression detail for AT3G58530 and AT3G62220
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT3G58530 RNI-like superfamily protein 825022 At3g58530 0.41 4.79 4.02 4.26 1406.60 2.13 0.91 1.71 -0.60 1.72 1.71
ath AT3G62220 Protein kinase superfamily protein 825395 At3g62220 0.41
Platform:

coex z = 4.0175



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 825022
(z-scored expression)		 825395
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
40.7 -6.0 -6.8 ERP115370 ERR3333443 Arabidopsis tissue atlas
39.9 -5.7 -7.0 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
25.1 -5.0 -5.0 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
19.3 -5.2 -3.8 SRP285119 SRR12698780 Time of day prioritizes the pool of translating mRNAs in response to heat stress
18.0 -4.3 -4.2 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
18.0 -3.8 -4.7 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
17.3 -4.3 -4.0 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
17.2 -3.9 -4.5 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
17.0 4.3 4.0 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
17.0 -4.4 -3.8 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
16.8 -6.5 -2.6 SRP172180 SRR8275324 Transcript profiles of developing Arabidopsis dgat1-1 mutant seed
16.8 -4.5 -3.7 SRP090459 SRR4296043 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
16.2 -6.2 -2.6 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
15.8 -3.9 -4.0 SRP274404 SRR12356829 Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [w5C6]
14.8 -4.0 -3.7 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
14.7 -3.6 -4.0 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
13.7 -3.8 -3.6 SRP229078 SRR10416624 Global transcriptomic analysis of Arabidopsis thaliana ecotype Columbia-0 subjected to magnesium deficiency
13.6 -3.9 -3.5 SRP285119 SRR12698782 Time of day prioritizes the pool of translating mRNAs in response to heat stress
13.3 3.5 3.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.0 -3.4 -3.8 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
12.8 -3.6 -3.6 SRP169564 SRR8206413 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
12.7 -3.3 -3.8 SRP126872 SRR6381398 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
12.7 -4.1 -3.1 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.6 3.2 4.0 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.4 -3.6 -3.5 SRP093913 SRR5054306 Transcriptome analysis after ectopically expressing KAN1 in SAM epidermis
12.0 3.6 3.3 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
11.9 -3.5 -3.4 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.8 -3.0 -4.0 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
11.7 3.5 3.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.7 -3.3 -3.5 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
11.6 3.3 3.6 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.6 2.9 4.0 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.5 -2.6 -4.5 SRP100712 SRR5285767 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
11.5 -2.6 -4.4 SRP101274 SRR5308909 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
11.4 -4.3 -2.7 SRP102178 SRR5360867 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.3 -3.2 -3.5 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.3 -3.6 -3.2 SRP158306 SRR7695196 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
11.1 3.1 3.6 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.1 -4.2 -2.6 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
10.9 -3.1 -3.5 ERP116123 ERR3414638 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.8 -2.6 -4.2 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.8 -2.1 -5.2 SRP155742 SRR8699957 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.8 -3.0 -3.6 SRP297920 SRR13253061 Transcript analysis under phosphate and iron deprivation in 7 day old Arabidopsis thaliana seedlings
10.7 3.2 3.3 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 -3.4 -3.1 SRP050945 SRR1696859 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
10.5 3.2 3.3 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.5 3.0 3.5 SRP103736 SRR5440785 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.5 3.1 3.3 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 -3.1 -3.4 SRP257480 SRR11573268 Relevance of Unfolded Protein Response to Spaceflight-Induced Transcriptional Reprogramming in Arabidopsis
10.2 -3.5 -3.0 SRP126574 SRR6369383 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.2 3.3 3.1 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 -2.9 -3.5 ERP116123 ERR3414642 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.1 3.2 3.2 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.0 -3.6 -2.8 ERP013651 ERR1194830 Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid
10.0 3.1 3.3 SRP070918 SRR3193434 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
Note: Samples whose contribution is more than 10 are outputted.



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