CoexViewer

Coexpression detail for AT3G59110 and SRF3
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT3G59110 Protein kinase superfamily protein 825080 At3g59110 0.6 4.95 3.82 4.75 238.30 1.10 2.61 2.57 0.99 1.08 4.39
ath SRF3 STRUBBELIG-receptor family 3 827941 At4g03390 0.6
Platform:

coex z = 3.818



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 825080
(z-scored expression)		 827941
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
36.2 -5.5 -6.5 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
28.9 -5.3 -5.5 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
24.0 -4.5 -5.4 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
22.2 -6.0 -3.7 SRP285380 SRR12712238 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
21.0 -4.8 -4.4 ERP115370 ERR3333443 Arabidopsis tissue atlas
20.4 -3.8 -5.3 SRP165731 SRR8054398 The embryonic transcriptome of Arabidopsis thaliana
18.9 -4.3 -4.4 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
16.6 4.1 4.0 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
15.5 -3.9 -4.0 SRP361288 SRR18124836 Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory
14.9 -3.8 -3.9 SRP132955 SRR6739821 Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression
14.6 -4.2 -3.5 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
14.3 -4.0 -3.6 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
13.8 3.6 3.8 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.7 3.7 3.7 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.4 3.5 3.9 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
13.3 3.7 3.6 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.8 -3.0 -4.2 ERP106738 ERR2286776 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
12.8 3.2 4.0 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.7 3.2 3.9 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.6 3.2 3.9 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.6 -3.8 -3.4 SRP253504 SRR11359544 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
12.6 3.5 3.6 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.5 -3.7 -3.3 SRP039091 SRR1179986 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
12.2 -3.3 -3.7 SRP297585 SRR13239294 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
12.0 3.3 3.6 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.8 -3.4 -3.4 SRP251246 SRR11213957 Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis
11.4 -3.5 -3.3 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.3 -3.4 -3.3 SRP285119 SRR12698780 Time of day prioritizes the pool of translating mRNAs in response to heat stress
11.3 3.3 3.5 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.3 3.3 3.4 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 -3.3 -3.3 SRP294481 SRR13156692 RNAseq Analysis of wild type and nrt1.13 in normal or low nitrate condition
10.9 -3.0 -3.6 SRP073724 SRR3419765 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
10.9 -3.5 -3.1 SRP339340 SRR16119309 Single seeds exhibit transcriptional heterogeneity during secondary dormancy induction
10.8 3.2 3.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.6 -3.1 -3.4 ERP021226 ERR1811891 Arabidopsis RNA-Seq Differential Gene Expression profiling
10.5 -3.7 -2.8 SRP315390 SRR14275192 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
10.5 3.2 3.3 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 3.2 3.3 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 2.9 3.6 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.2 -3.3 -3.1 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.2 3.3 3.1 SRP114806 SRR5894654 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.2 -2.6 -3.9 SRP302122 SRR13450896 The CLASSY family controls tissue-specific DNA methylation patterns in Arabidopsis [RNA-seq]
10.1 -3.1 -3.3 SRP126872 SRR6381405 B-box family proteins BBX18 and BBX23 control thermoresponsive hypocotyl growth in Arabidopsis
10.1 3.1 3.2 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.0 -3.0 -3.3 SRP048829 SRR1610321 Enhanced Salicylic Acid Biosynthesis Is Involved in Heterosis for Bacterial Defense in Arabidopsis
10.0 3.0 3.3 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
Note: Samples whose contribution is more than 10 are outputted.



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