CoexViewer

Coexpression detail for AT3G62820 and FMA
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath AT3G62820 Plant invertase/pectin methylesterase inhibitor superfamily protein 825457 At3g62820 0.38 10.37 9.06 8.88 37.50 2.81 0.43 0.58 5.25 1.37 6.39
ath FMA basic helix-loop-helix (bHLH) DNA-binding superfamily protein 822000 At3g24140 0.38
Platform:

coex z = 9.0558



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 825457
(z-scored expression)		 822000
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
44.9 -6.0 -7.5 SRP114806 SRR5894583 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
33.5 -4.7 -7.1 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
21.7 4.3 5.0 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
19.4 -4.6 -4.2 SRP345854 SRR16934641 Phytochrome B regulates reactive oxygen signaling during stress in plants.
16.1 1.6 10.1 SRP126574 SRR6369494 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
15.6 3.6 4.3 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.7 -4.0 -3.7 SRP238608 SRR10760446 Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock
14.3 2.3 6.4 SRP269194 SRR12108083 Mapping the transcriptional response to auxin in differentiated endodermal cells
14.0 -3.7 -3.8 SRP093972 SRR5057790 Transcriptome analysis after ectopically expressing REV in SAM epidermis
13.6 3.2 4.2 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.2 -3.8 -3.4 ERP106238 ERR2245583 PORCUPINE (PCP) regulates development in response to temperature variations through alternative splicing in Arabidopsis
12.9 -2.9 -4.4 SRP150217 SRR7289570 Widespread inter-individual gene expression variability in Arabidopsis thaliana
12.8 3.6 3.6 SRP267137 SRR12005769 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
12.7 4.2 3.0 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.5 3.4 3.6 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.8 3.1 3.9 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 3.2 3.5 SRP090458 SRR4295841 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
11.1 2.2 5.1 SRP285902 SRR12747398 ­Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis
10.9 -3.5 -3.1 SRP150217 SRR7289599 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.8 -3.3 -3.3 SRP091641 SRR4426947 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.6 -3.1 -3.4 SRP097877 SRR5205677 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.4 -3.0 -3.5 SRP266133 SRR11934491 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.3 -4.3 -2.4 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
10.3 3.1 3.3 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 -4.2 -2.4 SRP277946 SRR12469716 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
Note: Samples whose contribution is more than 10 are outputted.



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