CoexViewer

Coexpression detail for ATK5 and TOPII
Species Symbol Function* Entrez Gene ID* Other ID Selected probe Expression level (percentile) coex z ath-u.c4-0 coex z ath-r.c6-0 coex z ath-m.c9-0 coex z ath-m.c4-1_notissue coex z ath-m.c4-2_tis coex z ath-m.c4-2_str coex z ath-m.c4-2_hor coex z ath-m.c4-2_bio coex z ath-m.c4-2_lig coex z ath-e.c1-0
ath ATK5 kinesin 5 825867 At4g05190 0.33 15.83 13.99 13.39 10.90 4.31 4.09 2.98 3.41 2.61 12.93
ath TOPII topoisomerase II 821972 At3g23890 0.33
Platform:

coex z = 13.9943



Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.

Sample contribution score* 825867
(z-scored expression)		 821972
(z-scored expression)		 Experiment ID Sample ID Source Name in annotation
34.8 -5.4 -6.4 SRP102178 SRR5360842 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
29.8 -5.6 -5.4 SRP090458 SRR4295856 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
26.5 -5.8 -4.6 SRP073485 SRR3401786 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
21.2 -4.4 -4.8 SRP285090 SRR12697085 Differential alteration of plant functions by homologous fungal candidate effectors
20.9 -4.4 -4.7 SRP278468 SRR12495354 Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions
18.3 -3.6 -5.1 SRP091641 SRR4426351 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
18.1 -4.5 -4.1 SRP114806 SRR5894632 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
15.3 -3.9 -3.9 SRP100064 SRR5263006 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
15.0 -4.5 -3.3 SRP362867 SRR18254732 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
15.0 -4.5 -3.3 SRP324081 SRR14813599 ARATH-IN-OUT
13.8 -3.8 -3.6 SRP050945 SRR1696837 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
13.7 -3.6 -3.8 ERP115370 ERR3333442 Arabidopsis tissue atlas
13.7 -3.6 -3.8 ERP115370 ERR3333441 Arabidopsis tissue atlas
13.5 -3.7 -3.6 SRP100933 SRR5304255 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
13.3 -3.0 -4.4 SRP187719 SRR8689389 Transcriptomic analysis of pip5k1 pip5k2 mutant and wild type plants before or after inoculation with powdery mildew Erysiphe cichoracearum
13.2 -4.8 -2.7 SRP154321 SRR7536106 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
12.4 -2.8 -4.4 ERP116123 ERR3414884 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
12.3 -3.6 -3.4 SRP170953 SRR8249036 Gene Expression Atlas of Embryo Development in Arabidopsis
12.1 3.1 3.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.9 -4.2 -2.8 SRP150771 SRR7357980 RNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
11.8 -3.5 -3.3 SRP150217 SRR7289571 Widespread inter-individual gene expression variability in Arabidopsis thaliana
11.7 -3.4 -3.4 SRP187156 SRR8648403 Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection
11.6 -3.8 -3.1 SRP154323 SRR7536268 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
11.6 -3.5 -3.3 SRP233656 SRR10555731 Arabidopsis QUANTIREX
11.5 -3.4 -3.4 SRP218723 SRR9995082 Plant 22-nt siRNAs mediate translational repression and stress adaptation
11.3 -3.5 -3.2 SRP044776 SRR1523938 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
11.2 3.4 3.3 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.2 -3.4 -3.3 SRP258701 SRR11614791 Ethylene modulates the dynamics of translation via GCN2 and EIN2 in Arabidopsis under submergence
11.1 -3.6 -3.1 SRP137763 SRR6950025 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
11.1 -2.4 -4.6 SRP239091 SRR10804765 Genome-wide expression analysis of PTI and ETI responses in wild type and PRR-deficient Arabidopsis plants
10.9 -2.9 -3.8 SRP212098 SRR9602182 Gene expression profiling study by RNA-seq for identifying genes associated with sound vibration in plant
10.9 -3.5 -3.2 SRP100064 SRR5263008 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.9 -3.1 -3.5 SRP100064 SRR5263004 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.9 -3.2 -3.4 SRP100938 SRR5304627 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.9 -2.9 -3.8 SRP095347 SRR5120336 Genetic influences on gene expression in Arabidopsis thaliana
10.8 -3.7 -2.9 SRP242317 SRR10905209 The characterization of Mediator12 and 13 as conditional positive gene regulators in Arabidopsis [RNA-seq]
10.5 -2.8 -3.7 SRP149815 SRR7264693 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
10.4 3.4 3.1 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.4 -2.8 -3.8 SRP339340 SRR16119310 Single seeds exhibit transcriptional heterogeneity during secondary dormancy induction
10.4 -3.1 -3.3 SRP190896 SRR8850907 mRNA sequencing of msh1 memory line and non-memory (normal looking) sibling plants with isogenic Col-0 wild-type control in Arabidopsis
10.4 -4.2 -2.5 SRP238608 SRR10760446 Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock
10.3 -3.3 -3.1 SRP201971 SRR9331189 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types
10.3 -3.0 -3.4 SRP150217 SRR7289601 Widespread inter-individual gene expression variability in Arabidopsis thaliana
10.2 3.0 3.3 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.2 -2.1 -4.8 SRP271641 SRR12211735 Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold
10.2 2.8 3.6 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
10.1 3.2 3.2 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 -3.6 -2.8 SRP091641 SRR4426504 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
Note: Samples whose contribution is more than 10 are outputted.



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