CoexViewer
Coexpression detail for ATK5 and CDKB2;1
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-m.c9-0 | coex z ath-m.c4-1_notissue | coex z ath-m.c4-2_tis | coex z ath-m.c4-2_str | coex z ath-m.c4-2_hor | coex z ath-m.c4-2_bio | coex z ath-m.c4-2_lig | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ath | ATK5 | kinesin 5 | 825867 | At4g05190 | 0.33 | 15.82 | 14.01 | 13.34 | 3.90 | 4.29 | 4.92 | 2.79 | 3.28 | 3.39 | 8.13 | |
| ath | CDKB2;1 | cyclin-dependent kinase B2;1 | 843987 | At1g76540 | 0.33 |
|
coex z = 14.0109 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 825867 (z-scored expression) |
843987 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 36.1 | -5.8 | -6.3 | SRP073485 | SRR3401786 | Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation |
| 35.2 | -5.4 | -6.5 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 25.6 | -4.9 | -5.2 | SRP285380 | SRR12712240 | Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes |
| 19.8 | -4.4 | -4.5 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 19.2 | -5.6 | -3.5 | SRP090458 | SRR4295856 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat] |
| 17.7 | -3.6 | -4.9 | SRP091641 | SRR4426614 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 17.7 | -3.6 | -4.9 | SRP091641 | SRR4426351 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 17.7 | -4.4 | -4.0 | SRP285090 | SRR12697085 | Differential alteration of plant functions by homologous fungal candidate effectors |
| 16.9 | -3.7 | -4.5 | SRP100933 | SRR5304255 | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
| 16.7 | -4.5 | -3.7 | SRP114806 | SRR5894632 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 14.9 | -2.7 | -5.5 | SRP222258 | SRR15122126 | A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism |
| 14.4 | -3.8 | -3.8 | SRP103817 | SRR5444432 | Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana |
| 14.4 | -3.8 | -3.8 | SRP103817 | SRR5444470 | Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana |
| 13.3 | -3.8 | -3.5 | SRP050945 | SRR1696837 | Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana |
| 13.2 | -3.5 | -3.8 | SRP044776 | SRR1523938 | High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade |
| 12.0 | -5.0 | -2.4 | SRP361288 | SRR18124799 | Specific CBF transcription factors and cold-responsive genes fine-tune the early triggering response after acquisition of cold priming and memory |
| 11.9 | -2.9 | -4.1 | SRP100064 | SRR5263235 | Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary? |
| 11.8 | 3.4 | 3.5 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 11.7 | -4.8 | -2.4 | SRP154321 | SRR7536125 | Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse] |
| 11.7 | -4.8 | -2.4 | SRP154321 | SRR7536106 | Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse] |
| 11.3 | -3.7 | -3.1 | SRP279992 | SRR12582696 | Gene expression responses to ABA and to osmotic stress in the bon123 triple mutant |
| 11.3 | -3.3 | -3.4 | SRP277946 | SRR12469950 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 11.2 | 3.1 | 3.6 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 11.1 | -3.4 | -3.2 | SRP150217 | SRR7289615 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 11.1 | -3.2 | -3.5 | SRP132955 | SRR6739821 | Salicylic acid inhibits transcriptional repression activities of its receptors to promote defense gene expression |
| 10.9 | -2.9 | -3.8 | SRP095347 | SRR5120336 | Genetic influences on gene expression in Arabidopsis thaliana |
| 10.9 | -2.7 | -4.0 | SRP277946 | SRR12469644 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.8 | -3.4 | -3.2 | SRP187156 | SRR8648403 | Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection |
| 10.7 | 2.8 | 3.8 | SRP254177 | SRR11429303 | Time course of brassinolide treatment on Arabidopsis seedlings |
| 10.7 | -3.5 | -3.0 | SRP014482 | SRR525113 | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
| 10.6 | -3.6 | -2.9 | SRP170953 | SRR8249036 | Gene Expression Atlas of Embryo Development in Arabidopsis |
| 10.3 | 3.4 | 3.0 | SRP017386 | SRR627642 | Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings |
| 10.3 | -3.5 | -2.9 | SRP150217 | SRR7289571 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
| 10.2 | 3.1 | 3.3 | SRP169564 | SRR8206426 | Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression |
| 10.0 | -3.0 | -3.3 | SRP150217 | SRR7289601 | Widespread inter-individual gene expression variability in Arabidopsis thaliana |
The preparation time of this page was 0.8 [sec].
