CoexViewer
Coexpression detail for AT4G11320 and AT5G23820
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
Note: Samples whose contribution is more than 10 are outputted.
| Species | Symbol | Function* | Entrez Gene ID* | Other ID | Selected probe | Expression level (percentile) | coex z ath-u.c4-0 | coex z ath-r.c6-0 | coex z ath-e.c1-0 |
|---|---|---|---|---|---|---|---|---|---|
| ath | AT4G11320 | Papain family cysteine protease | 826734 | At4g11320 | 0.77 | 3.35 | 3.42 | 4.03 | |
| ath | AT5G23820 | MD-2-related lipid recognition domain-containing protein | 832447 | At5g23820 | 0.77 |
|
coex z = 3.4189 |
|
Both axes are relative gene expression values in base-2 logarithm against the averaged expression levels of each gene.
| Sample contribution score* | 826734 (z-scored expression) |
832447 (z-scored expression) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|---|---|
| 23.7 | -4.8 | -5.0 | SRP278468 | SRR12495354 | Autophagy mutants show delayed chloroplast development during de-etiolation in carbon limiting conditions |
| 16.3 | 3.2 | 5.0 | ERP123539 | ERR4471740 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 14.1 | -3.4 | -4.2 | SRP125388 | SRR6312356 | Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration |
| 14.1 | 4.2 | 3.3 | SRP091641 | SRR4426577 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.6 | 3.9 | 3.5 | SRP091641 | SRR4426597 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 13.3 | -3.7 | -3.5 | SRP073511 | SRR3403545 | Study of expression changes during RPS4-mediated resistance in Arabidopsis using a temperature-inducible system which mirrors NLR activation II |
| 12.9 | 3.5 | 3.7 | SRP091641 | SRR4426608 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 12.7 | 3.3 | 3.8 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 11.7 | -3.3 | -3.6 | ERP115370 | ERR3333443 | Arabidopsis tissue atlas |
| 11.1 | 3.5 | 3.2 | SRP091641 | SRR4426672 | Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity |
| 11.1 | -2.1 | -5.4 | SRP102178 | SRR5360842 | A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 10.9 | 2.7 | 4.1 | SRP277946 | SRR12470208 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.9 | 2.6 | 4.2 | ERP123539 | ERR4471741 | EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes |
| 10.2 | -2.9 | -3.5 | SRP187156 | SRR8648403 | Genome-wide profiling of Arabidopsis thaliana Col-0 and ein2/jar1 host responses to Macrophomina phaseolina infection |
| 10.1 | 3.4 | 3.0 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 10.1 | -3.7 | -2.8 | SRP101641 | SRR5330627 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 10.0 | 3.0 | 3.4 | SRP277946 | SRR12470193 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
The preparation time of this page was 0.7 [sec].
